RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GNALP38405 381 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 MPPED2Q15777 294 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 KCNJ8Q15842 424 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 PRAMEF6Q5VXH4 476 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 MFSD4AQ8N468 514 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 OR8S1Q8NH09 359 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 ACOT12Q8WYK0 555 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 THRSPQ92748 146 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 TMEM203Q969S6 136 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 PELI1Q96FA3 418 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 TMPRSS13Q9BYE2 586 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 C6orf62Q9GZU0 229 aaPredicted RBP12.21□□□□□ -0.46
SEC13-208ENST00000397109 ABCB9Q9NP78 766 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 ZNF319Q9P2F9 582 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 SVEP1Q4LDE5 3571 aa12.21□□□□□ -0.46
SEC13-208ENST00000397109 A8MXK9 166 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 LOC110117498-PIK3R3F6TDL0 507 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 PHF1O43189 567 aaPredicted RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 SRSF10O75494 262 aaKnown RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 ZNF205O95201 554 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 ZFP36P26651 326 aaKnown RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 RBMXP38159 391 aaKnown RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 RIDAP52758 137 aaKnown RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 CDK5R1Q15078 307 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 OR8B8Q15620 311 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 GFOD2Q3B7J2 385 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 SPANXN2Q5MJ10 180 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 LIPNQ5VXI9 398 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 TMEM91Q6ZNR0 172 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 FAM220AQ7Z4H9 259 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 NEIL1Q96FI4 390 aaPredicted RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 TMED9Q9BVK6 235 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 METTL17Q9H7H0 456 aaPredicted RBP12.2□□□□□ -0.46
SEC13-208ENST00000397109 SNTG1Q9NSN8 517 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 IKZF2Q9UKS7 526 aa12.2□□□□□ -0.46
SEC13-208ENST00000397109 A0A0U1RQV5 110 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 TMEM269A0A1B0GVZ9 245 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 A6NLC8 198 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 ANXA2P2A6NMY6 339 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 RNF212BA8MTL3 300 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 PSMD9O00233 223 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 ARL6IP5O75915 188 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 GRPP07492 148 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
SEC13-208ENST00000397109 SDC2P34741 201 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 FDX2Q6P4F2 183 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 MZT2AQ6P582 158 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 DCDC5Q6ZRR9 648 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 CCDC190Q86UF4 302 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 OR8B12Q8NGG6 310 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 RNF166Q96A37 237 aaPredicted RBP12.19□□□□□ -0.46
SEC13-208ENST00000397109 KCTD12Q96CX2 325 aaKnown RBP12.19□□□□□ -0.46
SEC13-208ENST00000397109 PGLYRP3Q96LB9 341 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 CEP19Q96LK0 163 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 PAPOLGQ9BWT3 736 aaKnown RBP12.19□□□□□ -0.46
SEC13-208ENST00000397109 TTTY10Q9BZA0 68 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 C7orf69Q9H7B7 122 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 OR5V1Q9UGF6 321 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 MPC1Q9Y5U8 109 aa12.19□□□□□ -0.46
SEC13-208ENST00000397109 FBN1P35555 2871 aaKnown RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 TRAV1-2A0A0B4J238 106 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 ANKRD61A6NGH8 418 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 LGALS8O00214 317 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 MAGEB4O15481 346 aaPredicted RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.462e-7■■■■■ 31.3
SEC13-208ENST00000397109 CALRP27797 417 aaKnown RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 YIF1BQ5BJH7 314 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 C1orf229Q6ZS94 237 aaPredicted RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 C1QL2Q7Z5L3 287 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 GHSRQ92847 366 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 MICU1Q9BPX6 476 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 SSBP3Q9BWW4 388 aaPredicted RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 BARHL1Q9BZE3 327 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 MOB1AQ9H8S9 216 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 ACOXLQ9NUZ1 547 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 C1orf123Q9NWV4 160 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 RHBDD3Q9Y3P4 386 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 SIRT4Q9Y6E7 314 aaPredicted RBP12.18□□□□□ -0.46
SEC13-208ENST00000397109 R4GMQ9 66 aa12.18□□□□□ -0.46
SEC13-208ENST00000397109 LOC105371242A0A075B767 164 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 A0A0A6YYJ9 748 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 TRAV38-1A0A0B4J264 116 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 TRBV2A0A0J9YWF9 115 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 hCG_1807616A0A1W2PRN6 198 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 NDUFA2O43678 99 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 TCF21O43680 179 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 CST4P01036 141 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 AVPP01185 164 aa12.17□□□□□ -0.46
SEC13-208ENST00000397109 MYL9P24844 172 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms