RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NOVA1P51513 510 aaKnown RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 GRB2P62993 217 aaKnown RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 RIPPLY1Q0D2K3 151 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 AIMP2Q13155 320 aaKnown RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF774Q6NX45 483 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 TMEM17Q86X19 198 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 POC1AQ8NBT0 407 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF799Q96GE5 643 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 NELFAQ9H3P2 528 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 DKKL1Q9UK85 242 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 ATG12O94817 140 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF883P0CG24 379 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 TAS2R31P59538 309 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 PDSS1Q5T2R2 415 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 SEMA6DQ8NFY4 1073 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 SLC25A43Q8WUT9 341 aaPredicted RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 PHYHIPLQ96FC7 376 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 ALKBH3Q96Q83 286 aaPredicted RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 TSNAXQ99598 290 aaKnown RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF2Q9BSG1 426 aaPredicted RBP11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 V9GYS6 101 aa11.75□□□□□ -0.53
GTF2F1-201ENST00000394456 MED13Q9UHV7 2174 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 A0A1W2PNU3 283 aaPredicted RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 FIGNL2A6NMB9 653 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 SCGNO76038 276 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 TMEM225BP0DP42 221 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 ADH6P28332 368 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 CHRFAM7AQ494W8 412 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 GJC3Q8NFK1 279 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 TMEM54Q969K7 222 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 MARS2Q96GW9 593 aaKnown RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 NUDT16L1Q9BRJ7 211 aaKnown RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 ULBP2Q9BZM5 246 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 URB1O60287 2271 aaKnown RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 CEACAM18A8MTB9 384 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF705EA8MWA4 302 aaPredicted RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 LRP3O75074 770 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 TSPAN9O75954 239 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 IGHV3-9P01782 118 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 RFPL3SP0C7P2 107 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 TPT1P13693 172 aaKnown RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 CD59P13987 128 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 NME2P22392 152 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 RBM39Q14498 530 aaKnown RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 FAM122CQ6P4D5 195 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 PRSS54Q6PEW0 395 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 SLC30A7Q8NEW0 376 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 TOMM40LQ969M1 308 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 MRPL24Q96A35 216 aaKnown RBP11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 STRADBQ9C0K7 418 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 CHST5Q9GZS9 411 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 SH2D2AQ9NP31 389 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 FOXJ2Q9P0K8 574 aa11.74□□□□□ -0.53
GTF2F1-201ENST00000394456 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 C9orf172C9J069 976 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 C3orf80F5H4A9 247 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 CDX4O14627 284 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 FBXO24O75426 580 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 SERPINA5P05154 406 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 CD79AP11912 226 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 B4GALT1P15291 398 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 NPBWR1P48145 328 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 MTCP1P56278 107 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 DSCR4P56555 118 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 STOML3Q8TAV4 291 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 RAB18Q9NP72 206 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 PLEKHJ1Q9NW61 149 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 GLS2Q9UI32 602 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 SHANK1Q9Y566 2161 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 C9JQL5 133 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 TLX3O43711 291 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF708P17019 499 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 NFYBP25208 207 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 GUCA1AP43080 201 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 LPAR6P43657 344 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 IL15RAQ13261 267 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 ESX1Q8N693 406 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 SLC5A7Q9GZV3 580 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 IGKV1-12A0A0C4DH73 117 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 MED19A0JLT2 244 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 IGKV1D-12P01611 117 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 THBS4P35443 961 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF239Q16600 458 aaKnown RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 IAH1Q2TAA2 248 aaPredicted RBP11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 ZNF528Q3MIS6 628 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 ETV3LQ6ZN32 361 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 Q6ZPA2 131 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 HAS2Q92819 552 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 TAAR9Q96RI9 348 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 SULT4A1Q9BR01 284 aa11.73□□□□□ -0.53
GTF2F1-201ENST00000394456 SLC6A15Q9H2J7 730 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms