RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SNAPC3Q92966 411 aa16.36■□□□□ 0.21
CLDND1-203ENST00000394181 SNRNP40Q96DI7 357 aaKnown RBP16.36■□□□□ 0.21
CLDND1-203ENST00000394181 OR51J1Q9H342 316 aa16.36■□□□□ 0.21
CLDND1-203ENST00000394181 CDH20Q9HBT6 801 aa16.36■□□□□ 0.21
CLDND1-203ENST00000394181 IGKV3-15P01624 115 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 CSTBP04080 98 aaKnown RBP16.35■□□□□ 0.21
CLDND1-203ENST00000394181 CD74P04233 296 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 GLI4P10075 376 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 RCVRNP35243 200 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 RAG2P55895 527 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 PPP1CBP62140 327 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 SF3B4Q15427 424 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLDND1-203ENST00000394181 C1orf162Q8NEQ5 155 aaPredicted RBP16.35■□□□□ 0.21
CLDND1-203ENST00000394181 DACT3Q96B18 629 aaPredicted RBP16.35■□□□□ 0.21
CLDND1-203ENST00000394181 BOD1Q96IK1 185 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 HS3ST6Q96QI5 342 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 SEC22CQ9BRL7 303 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 ACTR6Q9GZN1 396 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 ZNF230Q9UIE0 474 aaPredicted RBP16.35■□□□□ 0.21
CLDND1-203ENST00000394181 CHD8Q9HCK8 2581 aa16.35■□□□□ 0.21
CLDND1-203ENST00000394181 ZNF732B4DXR9 585 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 F8VVB4 439 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 F8VWA3 439 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 AMY2AP04746 511 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 CA6P23280 308 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 HOXC12P31275 282 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 HAAOP46952 286 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 NKAPLQ5M9Q1 402 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 ALKBH2Q6NS38 261 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-203ENST00000394181 FBXL14Q8N1E6 418 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 CSNK2A3Q8NEV1 391 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 OR5L1Q8NGL2 311 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 MAFIPQ8WZ33 124 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 FBXW5Q969U6 566 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 CHST6Q9GZX3 395 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 ASF1BQ9NVP2 202 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 TINAGQ9UJW2 476 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 NCOR2Q9Y618 2525 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 GEMIN2O14893 280 aaKnown RBP16.34■□□□□ 0.21
CLDND1-203ENST00000394181 CPT2P23786 658 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 TIMP3P35625 211 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 UCP2P55851 309 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 P2RY6Q15077 328 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 OR11H7Q8NGC8 314 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 DEDD2Q8WXF8 326 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 ST8SIA4Q92187 359 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 CPNE2Q96FN4 548 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-203ENST00000394181 TECTBQ96PL2 329 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 IFT46Q9NQC8 304 aa16.34■□□□□ 0.21
CLDND1-203ENST00000394181 NPDC1Q9NQX5 325 aaPredicted RBP16.34■□□□□ 0.21
CLDND1-203ENST00000394181 EIF3KQ9UBQ5 218 aaKnown RBP16.34■□□□□ 0.21
CLDND1-203ENST00000394181 PMP2P02689 132 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 CECR9P0C854 216 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 VSIG10L2P0DP72 767 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 HOXB1P14653 301 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-203ENST00000394181 CXCL3P19876 107 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 CEACAM8P31997 349 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-203ENST00000394181 HRH1P35367 487 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 PTGER4P35408 488 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 ARFRP1Q13795 201 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 DAZAP2Q15038 168 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-203ENST00000394181 IDO2Q6ZQW0 420 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 BEND4Q6ZU67 534 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 BPIFB2Q8N4F0 458 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 PXT1Q8NFP0 134 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 SLC25A40Q8TBP6 338 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 HDHD3Q9BSH5 251 aaPredicted RBP16.33■□□□□ 0.2
CLDND1-203ENST00000394181 MED28Q9H204 178 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 SH3BGRL2Q9UJC5 107 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 SMLR1H3BR10 107 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 MSTNO14793 375 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 CRHP06850 196 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 RBMS2Q15434 407 aaKnown RBP16.33■□□□□ 0.2
CLDND1-203ENST00000394181 OR52B4Q8NGK2 314 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 OR1J1Q8NGS3 322 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 OR5P3Q8WZ94 311 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 SLAMF9Q96A28 289 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 SLX1AQ9BQ83 275 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 FAAP24Q9BTP7 215 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 ST6GALNAC5Q9BVH7 336 aa16.33■□□□□ 0.2
CLDND1-203ENST00000394181 MOV10Q9HCE1 1003 aaKnown RBP16.33■□□□□ 0.2
CLDND1-203ENST00000394181 RLN1P04808 185 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 ZNF35P13682 527 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 MPV17P39210 176 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 MRPL49Q13405 166 aaKnown RBP16.32■□□□□ 0.2
CLDND1-203ENST00000394181 SCGB2B2Q4G0G5 96 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 GFRALQ6UXV0 394 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 FBXW12Q6X9E4 464 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 OSR2Q8N2R0 312 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 DYRK2Q92630 601 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 MRGPRFQ96AM1 343 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 PLEKHJ1Q9NW61 149 aa16.32■□□□□ 0.2
CLDND1-203ENST00000394181 OR5H1A6NKK0 313 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 ANKRD30BLA7E2S9 258 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 BCL3P20749 454 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 FAM189A2Q15884 450 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 PNLIPRP3Q17RR3 467 aa16.31■□□□□ 0.2
CLDND1-203ENST00000394181 PIAS4Q8N2W9 510 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-203ENST00000394181 OR13C8Q8NGS7 320 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms