RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ATP1B3P54709 279 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 DCAF12L2Q5VW00 463 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 ANGPTL5Q86XS5 388 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 SERPINA12Q8IW75 414 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 DNAAF1Q8NEP3 725 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 OR4M2Q8NGB6 313 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 OR5D14Q8NGL3 314 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 GPR148Q8TDV2 347 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 SMIM19Q96E16 107 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 SEH1LQ96EE3 360 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 ZNF184Q99676 751 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 CDCA4Q9BXL8 241 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 WDR13Q9H1Z4 485 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 Q9H521 79 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 ZCCHC4Q9H5U6 513 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 RASL12Q9NYN1 266 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 OR5V1Q9UGF6 321 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 ZNF281Q9Y2X9 895 aa15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 SIRT4Q9Y6E7 314 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-204ENST00000393546 WNK2Q9Y3S1 2297 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 SYNGR1O43759 233 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 HOXB4P17483 251 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 RBP2P50120 134 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 NPY4RP50391 375 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 SLC35A2P78381 396 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 WDR25Q64LD2 544 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 DMKNQ6E0U4 476 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 POC1AQ8NBT0 407 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 SPSB1Q96BD6 273 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 TMIGD2Q96BF3 282 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 MND1Q9BWT6 205 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 PKIBQ9C010 78 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 DUSP21Q9H596 190 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 KAAG1Q9UBP8 84 aa15.84■□□□□ 0.13
PDLIM7-204ENST00000393546 IGKV1-9A0A0C4DH69 117 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 KIAA1324LA8MWY0 1029 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 TMPRSS2O15393 492 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 RRP9O43818 475 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 NOS1APO75052 506 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 CD2P06729 351 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 ACAA1P09110 424 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 PGA5P0DJD9 388 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 MPZP25189 248 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 AZGP1P25311 298 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 MTCP1P56278 107 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 IL24Q13007 206 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 RBM48Q5RL73 367 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 ZNF841Q6ZN19 808 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 LHFPL2Q6ZUX7 228 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 SLC36A1Q7Z2H8 476 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 CALHM1Q8IU99 346 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 PARP16Q8N5Y8 322 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 ZFP41Q8N8Y5 198 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 OR5T2Q8NGG2 359 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 OR13C9Q8NGT0 318 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 GHSRQ92847 366 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 CCL13Q99616 98 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 DNTTIP1Q9H147 329 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 SNTG1Q9NSN8 517 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 PAK1IP1Q9NWT1 392 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 NLKQ9UBE8 527 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 C2CD3Q4AC94 2353 aa15.83■□□□□ 0.12
PDLIM7-204ENST00000393546 IGKV1-27A0A075B6S5 117 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 TRAPPC2LH3BP13 241 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 J3QLI3 93 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 RGS10O43665 173 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 ALX3O95076 343 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 MT-ND2P03891 347 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 CRHBPP24387 322 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 SOX2P48431 317 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 ATPAF1Q5TC12 328 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 CD276Q5ZPR3 534 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 STUMQ69YW2 141 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 RGP1Q92546 391 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 SGCDQ92629 289 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 ZNF488Q96MN9 340 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 OPALINQ96PE5 141 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 RASSF4Q9H2L5 321 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 MMP26Q9NRE1 261 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 CTSZQ9UBR2 303 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 BLOC1S6Q9UL45 172 aa15.82■□□□□ 0.12
PDLIM7-204ENST00000393546 NF1P21359 2839 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 LOC105371242A0A075B767 164 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 OR2AT4A6NND4 320 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 CYB5AP00167 134 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 SRP14P37108 136 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 BDH1Q02338 343 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 SMIM21Q3B7S5 101 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 YIF1BQ5BJH7 314 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 ACP7Q6ZNF0 438 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 IL17RELQ6ZVW7 336 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 MKXQ8IYA7 352 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 TEX29Q8N6K0 151 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 RAB40AQ8WXH6 277 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 MED30Q96HR3 178 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 CCDC90BQ9GZT6 254 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 C7orf69Q9H7B7 122 aa15.81■□□□□ 0.12
PDLIM7-204ENST00000393546 PNMA8CA0A1B0GUJ8 204 aa15.8■□□□□ 0.12
PDLIM7-204ENST00000393546 NKX6-3A6NJ46 265 aa15.8■□□□□ 0.12
PDLIM7-204ENST00000393546 DVL1O14640 695 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms