RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNF850A8MQ14 1090 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SLC17A2O00624 439 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ETHE1O95571 254 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 FUT1P19526 365 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SCAND1P57086 179 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 FXYD4P59646 89 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 HERV-K104P61576 105 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 HYAL1Q12794 435 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ANKRD33Q7Z3H0 272 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 MTURNQ8N3F0 131 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 MRPL43Q8N983 215 aaKnown RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 OR1E3Q8WZA6 343 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 LOXL4Q96JB6 756 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 MTHFD2LQ9H903 347 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 CLN8Q9UBY8 286 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 FOXD3Q9UJU5 478 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 CCL26Q9Y258 94 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PPIAL4AQ9Y536 164 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ARL2-SNX15V9GYD0 113 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 TANC1Q9C0D5 1861 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 TNFRSF10CO14798 259 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 HSPB1P04792 205 aaKnown RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF823P16415 610 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 GNRHRP30968 328 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PSMB3P49720 205 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ARF6P62330 175 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 TBPL1P62380 186 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PDGFRLQ15198 375 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 CLEC18BQ6UXF7 455 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 OR51A4Q8NGJ6 313 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 PTPMT1Q8WUK0 201 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 NMNAT3Q96T66 252 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 ALG12Q9BV10 488 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 HDAC8Q9BY41 377 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 Q9N2J8 555 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 POLR3KQ9Y2Y1 108 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 UBE2J1Q9Y385 318 aaPredicted RBP6.81□□□□□ -1.32
VTI1A-201ENST00000393077 SPACA6W5XKT8 324 aa6.81□□□□□ -1.32
VTI1A-201ENST00000393077 NSG1A0A0A6YYJ2 146 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 FAM221AA4D161 298 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 CHRM2P08172 466 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 IL6RP08887 468 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 TDGF1P13385 188 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 SELENOVP59797 346 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 MRPL58Q14197 206 aaKnown RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 P2RY6Q15077 328 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 TMEM234Q8WY98 164 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 SLC46A1Q96NT5 459 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 KCNK15Q9H427 330 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 RBKSQ9H477 322 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF107Q9UII5 783 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 HCFC2Q9Y5Z7 792 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ALPK2Q86TB3 2170 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 SDCBPO00560 298 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 P2RY1P47900 373 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 EFNB2P52799 333 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 NR0B2Q15466 257 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 EXT1Q16394 746 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ITPRIPL2Q3MIP1 535 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 FAM78BQ5VT40 261 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 STUMQ69YW2 141 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 C16orf82Q7Z2V1 217 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 MYPOPQ86VE0 399 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 UEVLDQ8IX04 471 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 SUMF1Q8NBK3 374 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 WFDC5Q8TCV5 224 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ADAMTS18Q8TE60 1221 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 CHODLQ9H9P2 273 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 CYTL1Q9NRR1 136 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 TAAR2Q9P1P5 351 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 KCNK6Q9Y257 313 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 CACNA1DQ01668 2161 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 DOCK8Q8NF50 2099 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ANGPTL7O43827 346 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 FGF17O60258 216 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 IGLV3-25P01717 112 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 GLI4P10075 376 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 MC5RP33032 325 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 TAS2R46P59540 309 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 RPS15P62841 145 aaKnown RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF90Q03938 601 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 TLE1Q04724 770 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ELAVL3Q14576 367 aaKnown RBP6.8□□□□□ -1.32
VTI1A-201ENST00000393077 LYG1Q8N1E2 194 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 GVQW1Q8N7I0 195 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 PARLQ9H300 379 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 KIR3DX1Q9H7L2 352 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 NAT8Q9UHE5 227 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 ST6GALNAC2Q9UJ37 374 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
VTI1A-201ENST00000393077 TRIOBPQ9H2D6 2365 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 SCN8AQ9UQD0 1980 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 DUXBA0A1W2PPF3 345 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 C4orf47A7E2U8 309 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 F11P03951 625 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 HNRNPA2B1P22626 353 aaKnown RBP6.79□□□□□ -1.32
VTI1A-201ENST00000393077 GLRA1P23415 457 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 SLC6A9P48067 706 aa6.79□□□□□ -1.32
VTI1A-201ENST00000393077 PFN3P60673 137 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms