RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.243e-7■■■■□ 19.9
SNRPB-201ENST00000381342 TRBV5-5A0A0J9YX44 114 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 OOEPA6NGQ2 149 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 B4DSR2 109 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 SULT1B1O43704 296 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 CD2P06729 351 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 OCMP0CE72 109 aaPredicted RBP13.52□□□□□ -0.25
SNRPB-201ENST00000381342 CFHR2P36980 270 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 FUT6P51993 359 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 YIF1BQ5BJH7 314 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 FAM90A1Q86YD7 464 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 SERPINA12Q8IW75 414 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 BATF2Q8N1L9 274 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 OR10Z1Q8NGY1 313 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 RFT1Q96AA3 541 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 SPSB1Q96BD6 273 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 ZNF488Q96MN9 340 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 OPALINQ96PE5 141 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 SPACA5Q96QH8 159 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
SNRPB-201ENST00000381342 WDR13Q9H1Z4 485 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 LPAR2Q9HBW0 351 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 ACOT13Q9NPJ3 140 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 PCDHB10Q9UN67 800 aa13.52□□□□□ -0.25
SNRPB-201ENST00000381342 MALRD1Q5VYJ5 2156 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 F5H0A9 414 aaPredicted RBP13.51□□□□□ -0.25
SNRPB-201ENST00000381342 FSTL3O95633 263 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 GYPAP02724 150 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 CD1AP06126 327 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 RPS2P15880 293 aaKnown RBP13.51□□□□□ -0.25
SNRPB-201ENST00000381342 PRKACBP22694 351 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 RBP2P50120 134 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 SEC61A1P61619 476 aaKnown RBP13.51□□□□□ -0.25
SNRPB-201ENST00000381342 Q499Y3 187 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 FAM120AOSQ5T036 256 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 LIPKQ5VXJ0 399 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 TEX36Q5VZQ5 186 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 LYPD2Q6UXB3 125 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 ZNF367Q7RTV3 350 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 RNF144BQ7Z419 303 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 GLCCI1Q86VQ1 547 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 OR51A2Q8NGJ7 313 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 OR5D14Q8NGL3 314 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 UFD1Q92890 307 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 TMED9Q9BVK6 235 aa13.51□□□□□ -0.25
SNRPB-201ENST00000381342 PATZ1Q9HBE1 687 aaKnown RBP13.51□□□□□ -0.25
SNRPB-201ENST00000381342 TRAV38-1A0A0B4J264 116 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 HCKP08631 526 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 MPZP25189 248 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
SNRPB-201ENST00000381342 POU3F4P49335 361 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 ATP1B3P54709 279 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 MTCP1P56278 107 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 EMX1Q04741 257 aaPredicted RBP13.5□□□□□ -0.25
SNRPB-201ENST00000381342 MLLT11Q13015 90 aaPredicted RBP13.5□□□□□ -0.25
SNRPB-201ENST00000381342 INSL4Q14641 139 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 CR1LQ2VPA4 569 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 DCDC5Q6ZRR9 648 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 LHFPL2Q6ZUX7 228 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 SVOPQ8N4V2 548 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 POC1AQ8NBT0 407 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 SLAMF9Q96A28 289 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 MGLLQ99685 303 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 PKIBQ9C010 78 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 SNTG1Q9NSN8 517 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 DNAJB11Q9UBS4 358 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 POLDIP2Q9Y2S7 368 aa13.5□□□□□ -0.25
SNRPB-201ENST00000381342 SONP18583 2426 aaKnown RBP13.5□□□□□ -0.25
SNRPB-201ENST00000381342 JMJD1CQ15652 2540 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 TRBV5-7A0A0A0MS05 114 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 A0A1W2PPK0 400 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 ZNF879B4DU55 563 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 MRPS14O60783 128 aaKnown RBP13.49□□□□□ -0.25
SNRPB-201ENST00000381342 INMTO95050 263 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 TFF1P04155 84 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 PGA5P0DJD9 388 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 RAB3AP20336 220 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 GLRA1P23415 457 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 DVL1P1P54792 670 aaPredicted RBP13.49□□□□□ -0.25
SNRPB-201ENST00000381342 IL24Q13007 206 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 MICBQ29980 383 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 KCTD21Q4G0X4 260 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 ZNF529Q6P280 563 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 ZNF773Q6PK81 442 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 CRIP3Q6Q6R5 217 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 SLC25A26Q70HW3 274 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 SPARTQ8N0X7 666 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 OR5D18Q8NGL1 313 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 ZNF671Q8TAW3 534 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 DERL3Q96Q80 235 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
SNRPB-201ENST00000381342 NKX3-1Q99801 234 aaPredicted RBP13.49□□□□□ -0.25
SNRPB-201ENST00000381342 ISYNA1Q9NPH2 558 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 CTSZQ9UBR2 303 aa13.49□□□□□ -0.25
SNRPB-201ENST00000381342 TRAV8-7A0A075B6U6 113 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 A0A1B0GW55 424 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 RNF212BA8MTL3 300 aa13.48□□□□□ -0.25
SNRPB-201ENST00000381342 ADAM20O43506 726 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms