RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 MRPS18BQ9Y676 258 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 SDK2Q58EX2 2172 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 IGHV1OR15-9A0A0B4J2B8 117 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 PPP5D1E7EU14 171 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 RECKO95980 971 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 GLAP06280 429 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 RAB13P51153 203 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 TMEM33P57088 247 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 CBLN2Q8IUK8 224 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 EXTL1Q92935 676 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 PATJQ8NI35 1801 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 LIPT2A6NK58 231 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 H3BMH7 237 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 TIMM8AO60220 97 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 TXNDC12O95881 172 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 OR6X1Q8NH79 312 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 KCNE4Q8WWG9 221 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 PIK3IP1Q96FE7 263 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 NMES1Q9C002 83 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 PCED1AQ9H1Q7 454 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 PPP1R3CQ9UQK1 317 aa11.29□□□□□ -0.6
DNMT3A-204ENST00000380756 AKAP6Q13023 2319 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ANKRD36A6QL64 1941 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 IGHV3-64DA0A0J9YX35 117 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 OR5H15A6NDH6 313 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 C4orf47A7E2U8 309 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ZIC2O95409 532 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 NQO2P16083 231 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 MICBQ29980 383 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 FHL5Q5TD97 284 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ZNF660Q6AZW8 331 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ZNF573Q86YE8 665 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 CTHRC1Q96CG8 243 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 RIMS4Q9H426 269 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ASCL1P50553 236 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 CCL7P80098 99 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 DHODHQ02127 395 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 RAB35Q15286 201 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 RHBDD2Q6NTF9 364 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ZDHHC23Q8IYP9 409 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ZNF345Q14585 488 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 BATFQ16520 125 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 SSX9Q7RTT3 188 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 CABLES2Q9BTV7 478 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 IFT22Q9H7X7 185 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 POLDIP2Q9Y2S7 368 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 CACNA1EQ15878 2313 aa11.28□□□□□ -0.6
DNMT3A-204ENST00000380756 KLRC4-KLRK1H3BQV0 150 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 ADAM10O14672 748 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 IAPPP10997 89 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 SURF2Q15527 256 aaPredicted RBP11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 ZNF787Q6DD87 383 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 RTL8AQ9BWD3 113 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 MFRPQ9BY79 579 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 LPAR3Q9UBY5 353 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 VSIG4Q9Y279 399 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 SBF1O95248 1867 aa11.27□□□□□ -0.6
DNMT3A-204ENST00000380756 SNCAP37840 140 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 FZD5Q13467 585 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 LAMTOR1Q6IAA8 161 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 OR2V1Q8NHB1 315 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 PTX4Q96A99 478 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 NAA60Q9H7X0 242 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 BTBD17A6NE02 478 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 SCGB1D1O95968 90 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 PNPP00491 289 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 OR5AC1P0C628 307 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 NXPH1P58417 271 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 TBC1D28Q2M2D7 210 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 PATZ1Q9HBE1 687 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 MTCH2Q9Y6C9 303 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 A0A0G2JK05 382 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 ZNF32P17041 273 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 H2BFSP57053 126 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 ZNF774Q6NX45 483 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 GUSBP11Q6P575 273 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 FAM24BQ8N5W8 94 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 GDF15Q99988 308 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 FAM234AQ9H0X4 552 aa11.27□□□□□ -0.61
DNMT3A-204ENST00000380756 TUBG2Q9NRH3 451 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms