RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 hCG_1809904A0A1W2PP81 198 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 A0A1W2PPE2 198 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 A0A1W2PR64 198 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 A0A1W2PRV1 198 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 TCRBV3S1A0A5B6 114 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 LOC110117498-PIK3R3F6TDL0 507 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 J3QT63 122 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 TSPAN15O95858 294 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 NRASP01111 189 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 ACTR3P61158 418 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 MFGE8Q08431 387 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-204ENST00000380749 DMRTC1Q5HYR2 192 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 CLVS2Q5SYC1 327 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 ZNF322Q6U7Q0 402 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-204ENST00000380749 ZNF573Q86YE8 665 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 ZNF561Q8N587 486 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 OR5K1Q8NHB7 308 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 MNTQ99583 582 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 SSX3Q99909 188 aa14.07□□□□□ -0.16
HMGN1-204ENST00000380749 RFPL4AA6NLU0 287 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 PRR32B1ATL7 298 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 RFPL4AL1F8VTS6 287 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 NXPH2O95156 264 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 TTRP02766 147 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 PGA5P0DJD9 388 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 HAAOP46952 286 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 CXCR4P61073 352 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 ESRRGP62508 458 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 RPL31P62899 125 aaKnown RBP14.06□□□□□ -0.16
HMGN1-204ENST00000380749 LRRC75BQ2VPJ9 315 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 FAHD1Q6P587 224 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 C11orf88Q6PI97 169 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 OR4C13Q8NGP0 309 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 RAB18Q9NP72 206 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 C19orf12Q9NSK7 152 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 FBLN5Q9UBX5 448 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 POMPQ9Y244 141 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 R4GMQ9 66 aa14.06□□□□□ -0.16
HMGN1-204ENST00000380749 PRKYO43930 277 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 PTGES3Q15185 160 aaKnown RBP14.05□□□□□ -0.16
HMGN1-204ENST00000380749 AANATQ16613 207 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 SLC35E4Q6ICL7 350 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 HCP5Q6MZN7 132 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 Q6ZTK2 550 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 MEPCEQ7L2J0 689 aaKnown RBP14.05□□□□□ -0.16
HMGN1-204ENST00000380749 SLC35F2Q8IXU6 374 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 ZNF488Q96MN9 340 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 RANBP3Q9H6Z4 567 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-204ENST00000380749 HEXA-AS1Q9H8Q6 139 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 GPR173Q9NS66 373 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 USE1Q9NZ43 259 aa14.05□□□□□ -0.16
HMGN1-204ENST00000380749 H2AFY2Q9P0M6 372 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-204ENST00000380749 DNAH3Q8TD57 4116 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 DHRS7CA6NNS2 312 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 ZNF670-ZNF695F2Z2N8 137 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 DLGAP1O14490 977 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 CSF1P09603 554 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 LY6EQ16553 131 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 NXNL2Q5VZ03 156 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 MKXQ8IYA7 352 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 CD177Q8N6Q3 437 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 C17orf50Q8WW18 174 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 PLEKHA1Q9HB21 404 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 ADGRL4Q9HBW9 690 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 KRT84Q9NSB2 600 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 V9GYS6 101 aa14.04□□□□□ -0.16
HMGN1-204ENST00000380749 SYNGR1O43759 233 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 NOS1APO75052 506 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-204ENST00000380749 SRSF10O75494 262 aaKnown RBP14.03□□□□□ -0.16
HMGN1-204ENST00000380749 DNAJC8O75937 253 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-204ENST00000380749 PRDX2P32119 198 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 CEBPDP49716 269 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-204ENST00000380749 DAPP51397 102 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 LGALS4P56470 323 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 HERPUD1Q15011 391 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 TMEM42Q69YG0 159 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 LIAT1Q6ZQX7 453 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 ASRGL1Q7L266 308 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 GID4Q8IVV7 300 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 ELMOD2Q8IZ81 293 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 TCEANCQ8N8B7 351 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 DTX3Q8N9I9 347 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 OR2T6Q8NHC8 308 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 FAM110DQ8TAY7 271 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-204ENST00000380749 RORBQ92753 470 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 PPP1R14AQ96A00 147 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 APOL4Q9BPW4 351 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 NRIP2Q9BQI9 281 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 MEGF9Q9H1U4 602 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 CLN6Q9NWW5 311 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 OR14J1Q9UGF5 321 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 ENOPH1Q9UHY7 261 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 OR52A1Q9UKL2 312 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 SNX5Q9Y5X3 404 aa14.03□□□□□ -0.16
HMGN1-204ENST00000380749 PQLC2LA1A4F0 135 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 M0R129 80 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 COX7A1P24310 79 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 MPZP25189 248 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 ERVFRD-1P60508 538 aa14.02□□□□□ -0.17
HMGN1-204ENST00000380749 PLEKHG7Q6ZR37 379 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms