RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ACY3Q96HD9 319 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 HES4Q9HCC6 221 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 FAM96BQ9Y3D0 163 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 SFTA3P0C7M3 94 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 COL9A1P20849 921 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 ZP3P21754 424 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 PAX6P26367 422 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 NXPH1P58417 271 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 HLXQ14774 488 aaPredicted RBP14.3□□□□□ -0.12
COL2A1-202ENST00000380518 PDCD1Q15116 288 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 MICBQ29980 383 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 MRGPREQ86SM8 312 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 FAAP24Q9BTP7 215 aa14.3□□□□□ -0.12
COL2A1-202ENST00000380518 TNRC6CQ9HCJ0 1690 aaKnown RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 HRASP01112 189 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 SRD5A2P31213 254 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 OR13G1Q8NGZ3 307 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 ZNRF4Q8WWF5 429 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 FAM103A1Q9BTL3 118 aaKnown RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 C9orf170A2RU37 121 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 SLC31A2O15432 143 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 DMKNQ6E0U4 476 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 C20orf196Q8IYI0 205 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 ABHD1Q96SE0 405 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 TMPRSS5Q9H3S3 457 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 FAM60AQ9NP50 221 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 DUS4LO95620 317 aaKnown RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 IGFBP7Q16270 282 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 C6orf201Q7Z4U5 140 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 OR10D3Q8NH80 312 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 MMP26Q9NRE1 261 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 TIMM9Q9Y5J7 89 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 IGHV1OR15-9A0A0B4J2B8 117 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 HYAL3O43820 417 aaPredicted RBP14.29□□□□□ -0.12
COL2A1-202ENST00000380518 STUMQ69YW2 141 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 GFRALQ6UXV0 394 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 ZNF429Q86V71 674 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 FBXO17Q96EF6 278 aa14.29□□□□□ -0.12
COL2A1-202ENST00000380518 CDC14BO60729 498 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 ONECUT2O95948 504 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 MT-CO3P00414 261 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 CA6P23280 308 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 CEACAM6P40199 344 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 OR2T6Q8NHC8 308 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 TMEM56Q96MV1 263 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 RNF24Q9Y225 148 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 WSB1Q9Y6I7 421 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 EPHA8P29322 1005 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-202ENST00000380518 RAB32Q13637 225 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 ALKBH6Q3KRA9 238 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 JMJD6Q6NYC1 403 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-202ENST00000380518 OR10V1Q8NGI7 309 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 UBALD1Q8TB05 177 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 MPC2O95563 127 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 RAB5AP20339 215 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 HOXC8P31273 242 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 SSPNQ14714 243 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 RHBDD2Q6NTF9 364 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 CXorf67Q86X51 503 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-202ENST00000380518 OR4D9Q8NGE8 314 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 HES7Q9BYE0 225 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 CNTD2Q9H8S5 307 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 NHSQ6T4R5 1651 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 ANKRD20A5PA0PJZ0 165 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 ADAM20O43506 726 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 CSF2RBP32927 897 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 MDH2P40926 338 aaKnown RBP14.28□□□□□ -0.12
COL2A1-202ENST00000380518 DUSP18Q8NEJ0 188 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 NUBPLQ8TB37 319 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 NAA60Q9H7X0 242 aa14.28□□□□□ -0.12
COL2A1-202ENST00000380518 OR5I1Q13606 314 aa14.27□□□□□ -0.12
COL2A1-202ENST00000380518 TRAT1Q6PIZ9 186 aa14.27□□□□□ -0.12
COL2A1-202ENST00000380518 OR6X1Q8NH79 312 aa14.27□□□□□ -0.12
COL2A1-202ENST00000380518 MRM2Q9UI43 246 aaKnown RBP14.27□□□□□ -0.12
COL2A1-202ENST00000380518 TRBV5-3A0A0A0MS03 114 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 FCER1GP30273 86 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 MPLP40238 635 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 OR3A4PP47883 348 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 MEOX1P50221 254 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 PPP1CBP62140 327 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 ZNF770Q6IQ21 691 aaPredicted RBP14.27□□□□□ -0.13
COL2A1-202ENST00000380518 MAP6Q96JE9 813 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 GPR137Q96N19 417 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 GLI3P10071 1580 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 TOX3O15405 576 aaPredicted RBP14.27□□□□□ -0.13
COL2A1-202ENST00000380518 ERVFC1-1P60608 527 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 MRM1Q6IN84 353 aaKnown RBP14.27□□□□□ -0.13
COL2A1-202ENST00000380518 DHRS13Q6UX07 377 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 PRSS42Q7Z5A4 293 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 MOB3BQ86TA1 216 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 OR10AD1Q8NGE0 317 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 PHYHIPLQ96FC7 376 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 C12orf57Q99622 126 aa14.27□□□□□ -0.13
COL2A1-202ENST00000380518 NUP214P35658 2090 aaPredicted RBP14.27□□□□□ -0.13
COL2A1-202ENST00000380518 C3orf85A0A1B0GTC6 90 aa14.26□□□□□ -0.13
COL2A1-202ENST00000380518 PPP1CAP62136 330 aa14.26□□□□□ -0.13
COL2A1-202ENST00000380518 PRSS54Q6PEW0 395 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms