RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MLF1P58340 268 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 CKS1BP61024 79 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SSBP1Q04837 148 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 EXOSC7Q15024 291 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 EXT1Q16394 746 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 CTXN3Q4LDR2 81 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SPATA45Q537H7 98 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 C1orf53Q5VUE5 145 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 DNM1P34Q6PK57 102 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 STAC2Q6ZMT1 411 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SLCO4C1Q6ZQN7 724 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 NXPE1Q8N323 547 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 OR4B1Q8NGF8 309 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM242Q9NWH2 141 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PILRBQ9UKJ0 227 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 RCL1Q9Y2P8 373 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 GJB5O95377 273 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 TIA1P31483 386 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 GABRA2P47869 451 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 FOXL2P58012 376 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 TAS2R30P59541 319 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SNRPD1P62314 119 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 RAB11AP62491 216 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 RAE1P78406 368 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SLC17A1Q14916 467 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 ATG4DQ86TL0 474 aaPredicted RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 OR51D1Q8NGF3 324 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 AQP3Q92482 292 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PRRC1Q96M27 445 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 GABRG3Q99928 467 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 WSB2Q9NYS7 404 aaPredicted RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 EDDM13A0A1B0GTR0 161 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 M0QZQ0 153 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 GDF9O60383 454 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 STK17BO94768 372 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 DRD1P21728 446 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 S100GP29377 79 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PBX2P40425 430 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SOX2P48431 317 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 EMP2P54851 167 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SUMO1P63165 101 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 C5orf64Q2M2E5 130 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PIP5KL1Q5T9C9 394 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF627Q7L945 461 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 C9orf40Q8IXQ3 194 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 OR52R1Q8NGF1 315 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 OR5AR1Q8NGP9 310 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 OR2AJ1Q8NGZ0 328 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 SARAFQ96BY9 339 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PRR13Q9NZ81 148 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 DOCK6Q96HP0 2047 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PLXNA3P51805 1871 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 A0A1B0GUS0 222 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 TMPRSS11DO60235 418 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 MAS1P04201 325 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 PF4V1P10720 104 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 NDUFV2P19404 249 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CDKN1AP38936 164 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 PFN3P60673 137 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 RAB31Q13636 194 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 NSDHLQ15738 373 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 GGTA1PQ4G0N0 100 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 RPL22L1Q6P5R6 122 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 MRPL21Q7Z2W9 205 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 COMMD6Q7Z4G1 85 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 OR52M1Q8NGK5 317 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 KISS1RQ969F8 398 aaPredicted RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 MUC3AQ02505 3323 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 VWA8A3KMH1 1905 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CDC14CA4D256 554 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 YPEL1O60688 119 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 MSR1P21757 451 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 OR1D2P34982 312 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 TMEM240Q5SV17 173 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 Q6ZWC4 215 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF519Q8TB69 540 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 SLC35G5Q96KT7 338 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 YPEL2Q96QA6 119 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 SLC12A9Q9BXP2 914 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 SH3BGRL3Q9H299 93 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 KCNK15Q9H427 330 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 SLC13A4Q9UKG4 626 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 MRPS28Q9Y2Q9 187 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 IGLON5A6NGN9 336 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 HYPMO75409 117 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 GYPBP06028 91 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CRYGCP07315 174 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CD55P08174 381 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CTSAP10619 480 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 AZU1P20160 251 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CCNOP22674 350 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CORO1AP31146 461 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 APOBEC1P41238 236 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 RPL23AP62750 156 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 GNMTQ14749 295 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms