RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TMEM272A0A1B0GTI8 110 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 DKK1O94907 266 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ALDOBP05062 364 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 HEXAP06865 529 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 FAHP16930 419 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 SLC6A1P30531 599 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 SSTR2P30874 369 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF782Q6ZMW2 699 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 AAED1Q7RTV5 226 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 OR1J2Q8NGS2 313 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 FNDC9Q8TBE3 224 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 PSMF1Q92530 271 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 C5orf30Q96GV9 206 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ELOVL1Q9BW60 279 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 TP53TG5Q9Y2B4 290 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 CACNA1DQ01668 2161 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 SULT1C2O00338 296 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 NKX2-8O15522 239 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 MPIG6BO95866 241 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 LINC00614P0C842 121 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 BTCP35070 178 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 TNFRSF9Q07011 255 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 RNF212Q495C1 297 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 SPNS3Q6ZMD2 512 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ANGPTL5Q86XS5 388 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 C12orf45Q8N5I9 185 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 SLC25A43Q8WUT9 341 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 RNF133Q8WVZ7 376 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 DEDD2Q8WXF8 326 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 MS4A7Q9GZW8 240 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-201ENST00000379433 TOLLIPQ9H0E2 274 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 HRASLSQ9HDD0 168 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 COL6A6A6NMZ7 2263 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF318Q5VUA4 2279 aa9.49□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF878C9JN71 531 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 CD3DP04234 171 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SERPINA7P05543 415 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 CRHP06850 196 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 FHITP49789 147 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SNU13P55769 128 aaKnown RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 CSNK2A1P68400 391 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF774Q6NX45 483 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 GVQW1Q8N7I0 195 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SMIM4Q8WVI0 70 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 NUDCD2Q8WVJ2 157 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 HSPB11Q9Y547 144 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 ACOT7O00154 380 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 HPXP02790 462 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 PPP3CBP16298 524 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 CASRP41180 1078 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 MMP15P51511 669 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 ROM1Q03395 351 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 ZP4Q12836 540 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 PDCD1Q15116 288 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 LINC00303Q3SY05 128 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 OR52W1Q6IF63 320 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF383Q8NA42 475 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 HAVCR1Q96D42 359 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 OR2M2Q96R28 347 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 TMUB1Q9BVT8 246 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 GHRLQ9UBU3 117 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 KCNIP3Q9Y2W7 256 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SMG1Q96Q15 3661 aaKnown RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 TLN1Q9Y490 2541 aaKnown RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 A0A1W2PR80 420 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 DHHO43323 396 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SIX6O95475 246 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 RAF1P04049 648 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 LCATP04180 440 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 GNB3P16520 340 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SOX8P57073 446 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 ARG2P78540 354 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 PMPCAQ10713 525 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 PMS2P11Q13670 270 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 OR8G1Q15617 311 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 CEACAM16Q2WEN9 425 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 OR6M1Q8NGM8 313 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 NICN1Q9BSH3 213 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 NAA11Q9BSU3 229 aaPredicted RBP9.48□□□□□ -0.89
NEDD9-201ENST00000379433 SELENOIQ9C0D9 397 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 MTCH1Q9NZJ7 389 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 OPN4Q9UHM6 478 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 GPR160Q9UJ42 338 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 RHBDD3Q9Y3P4 386 aa9.48□□□□□ -0.89
NEDD9-201ENST00000379433 A0A0A6YYH2 397 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 GGT3PA6NGU5 568 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 A6NJ64 397 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 LRRC3CA6NJW4 275 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 FABP7O15540 132 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 TGOLN2O43493 480 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 ZNF432O94892 652 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 FOXG1P55316 489 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-201ENST00000379433 TMEM244Q5VVB8 128 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 NOXA1Q86UR1 476 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 ARRDC1Q8N5I2 433 aa9.47□□□□□ -0.89
NEDD9-201ENST00000379433 OR51S1Q8NGJ8 323 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms