RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 OSR2Q8N2R0 312 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 CSNK2A3Q8NEV1 391 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 ST8SIA4Q92187 359 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 RADILQ96JH8 1075 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■■■□ 24.6
RAB3IP-203ENST00000378809 ZNF629Q9UEG4 869 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 PRRC2CQ9Y520 2896 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 OR2AT4A6NND4 320 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 GEMIN2O14893 280 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 HLA-AP01891 365 aaKnown RBP12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 SFTPBP07988 381 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 GIPP09681 153 aaPredicted RBP12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 FOXC1Q12948 553 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 TSC22D1Q15714 1073 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 SPATA46Q5T0L3 261 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 FBXL14Q8N1E6 418 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 OR2AK2Q8NG84 335 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 CRIM1Q9NZV1 1036 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 ANAPC10Q9UM13 185 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 ST3GAL6Q9Y274 331 aa12.74□□□□□ -0.37
RAB3IP-203ENST00000378809 NAT1P18440 290 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 IL32P24001 234 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 MPZP25189 248 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 HAAOP46952 286 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 IDH3GP51553 393 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 PER3P56645 1201 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 ACSF3Q4G176 576 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 RTL6Q6ICC9 239 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 VWA1Q6PCB0 445 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 Q6ZT83 130 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 RFPL4BQ6ZWI9 263 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 HOGA1Q86XE5 327 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 PXT1Q8NFP0 134 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 OR5L1Q8NGL2 311 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 WNT2BQ93097 391 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 MRGPRFQ96AM1 343 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 ZNF581Q9P0T4 197 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 LUZP4Q9P127 313 aa12.73□□□□□ -0.37
RAB3IP-203ENST00000378809 CD300LBA8K4G0 201 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 SLC22A5O76082 557 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 PDGFAP04085 211 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 TPOP07202 933 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 CELA3BP08861 270 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 HOXC12P31275 282 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 DHRS2Q13268 280 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 C2orf68Q2NKX9 166 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 CHRFAM7AQ494W8 412 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 IGFL3Q6UXB1 125 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 ASCL4Q6XD76 172 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 C12orf45Q8N5I9 185 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 ZDHHC22Q8N966 263 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 MARCH1Q8TCQ1 289 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 WBP1Q96G27 269 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 GON7Q9BXV9 100 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 PIPOXQ9P0Z9 390 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 NOP16Q9Y3C1 178 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 MYO7BQ6PIF6 2116 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 SDCBPO00560 298 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 GSTT2P0CG29 244 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 ZNF35P13682 527 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 AKR1C4P17516 323 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 VAMP1P23763 118 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 KIR2DL2P43627 348 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 NPY4RP50391 375 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 TAS2R46P59540 309 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 RAP2BP61225 183 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 MRPL49Q13405 166 aaKnown RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 PDCD1Q15116 288 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 SIGIRRQ6IA17 410 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 OR2A2Q6IF42 318 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 BRICD5Q6PL45 260 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 TMEM17Q86X19 198 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 SLC7A5P1Q8MH63 180 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 ARRDC1Q8N5I2 433 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 HPSE2Q8WWQ2 592 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 WDR89Q96FK6 387 aaPredicted RBP12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 CDH20Q9HBT6 801 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
RAB3IP-203ENST00000378809 PQLC2LA1A4F0 135 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 ZNF732B4DXR9 585 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 F5H5P2 479 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 H3BUI4 141 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 CST4P01036 141 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 H2BFSP57053 126 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 FOXF2Q12947 444 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 PPA1Q15181 289 aa12.71□□□□□ -0.37
RAB3IP-203ENST00000378809 CEACAM21Q3KPI0 293 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms