RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 C19orf18Q8NEA5 215 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 DEFB108BQ8NET1 73 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 RAB39BQ96DA2 213 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 DERL3Q96Q80 235 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 RASL12Q9NYN1 266 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 TAS2R4Q9NYW5 299 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 POLDIP2Q9Y2S7 368 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 CEACAM18A8MTB9 384 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 C3orf80F5H4A9 247 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 NDUFA2O43678 99 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 CD5LO43866 347 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 SC5DO75845 299 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 ALDOBP05062 364 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 PGA5P0DJD9 388 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 RAB3AP20336 220 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 ACSM3Q53FZ2 586 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 DCDC5Q6ZRR9 648 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 FAM90A1Q86YD7 464 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 POC1AQ8NBT0 407 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 THRSPQ92748 146 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 C12orf43Q96C57 262 aaKnown RBP15.67■□□□□ 0.1
SSU72-203ENST00000378725 MSI2Q96DH6 328 aaKnown RBP15.67■□□□□ 0.1
SSU72-203ENST00000378725 OR14A2Q96R54 314 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 WDR13Q9H1Z4 485 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 GSX1Q9H4S2 264 aaPredicted RBP15.67■□□□□ 0.1
SSU72-203ENST00000378725 MIOXQ9UGB7 285 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 PCDHB10Q9UN67 800 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 SF3B6Q9Y3B4 125 aaKnown RBP15.67■□□□□ 0.1
SSU72-203ENST00000378725 CR1P17927 2039 aa15.67■□□□□ 0.1
SSU72-203ENST00000378725 FAM157AC9JC47 383 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 PIN1P1O15428 100 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 OCMP0CE72 109 aaPredicted RBP15.66■□□□□ 0.1
SSU72-203ENST00000378725 FSTP19883 344 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 TGFBR2P37173 567 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 ERVK11-1P61568 191 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 MICBQ29980 383 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 ARMCX4Q5H9R4 360 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 CLEC9AQ6UXN8 241 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 RNF144BQ7Z419 303 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 LINC01356Q8N9X3 169 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 OR51A2Q8NGJ7 313 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 FCGR1BQ92637 280 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 ORAI1Q96D31 301 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 SEH1LQ96EE3 360 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 NRIP2Q9BQI9 281 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 TMED9Q9BVK6 235 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 FOXJ3Q9UPW0 622 aa15.66■□□□□ 0.1
SSU72-203ENST00000378725 IGHV3OR15-7A0A075B7D8 119 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 B4DSR2 109 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 TNFAIP8O95379 198 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 GLRA1P23415 457 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 MAPK3P27361 379 aaPredicted RBP15.65■□□□□ 0.1
SSU72-203ENST00000378725 PDZK1IP1Q13113 114 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 TRAM1Q15629 374 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 KISS1Q15726 138 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 ATPAF1Q5TC12 328 aaPredicted RBP15.65■□□□□ 0.1
SSU72-203ENST00000378725 LYPD2Q6UXB3 125 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 HES4Q9HCC6 221 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 TMEM138Q9NPI0 162 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 MTCH1Q9NZJ7 389 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 KAAG1Q9UBP8 84 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 CELSR1Q9NYQ6 3014 aa15.65■□□□□ 0.1
SSU72-203ENST00000378725 FLNAP21333 2647 aaKnown RBP15.64■□□□□ 0.1
SSU72-203ENST00000378725 TRAV8-7A0A075B6U6 113 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 A0A1W2PPK0 400 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 MAGEB3O15480 346 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 GYPAP02724 150 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 HCKP08631 526 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 PSMA1P25786 263 aaKnown RBP15.64■□□□□ 0.09
SSU72-203ENST00000378725 GP2P55259 537 aaKnown RBP15.64■□□□□ 0.09
SSU72-203ENST00000378725 RPS25P62851 125 aaKnown RBP15.64■□□□□ 0.09
SSU72-203ENST00000378725 PPP3R1P63098 170 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 INSL4Q14641 139 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 SSX1Q16384 188 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 STUMQ69YW2 141 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 ZNF841Q6ZN19 808 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 ACP7Q6ZNF0 438 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 TMEM91Q6ZNR0 172 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 SLC25A26Q70HW3 274 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 MKXQ8IYA7 352 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 OR52N4Q8NGI2 321 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 TMEM203Q969S6 136 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 TMIGD2Q96BF3 282 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 ZNF488Q96MN9 340 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 SPACA5Q96QH8 159 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 ZNF696Q9H7X3 374 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 NOX4Q9NPH5 578 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 NLKQ9UBE8 527 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 CKLFQ9UBR5 152 aa15.64■□□□□ 0.09
SSU72-203ENST00000378725 AMY2BP19961 511 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 BDKRB2P30411 391 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 GABRA5P31644 462 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 ZP1P60852 638 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 GMFBP60983 142 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 CEACAM19Q7Z692 300 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 LURAP1LQ8IV03 231 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 SAXO1Q8IYX7 474 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 ZSCAN4Q8NAM6 433 aaPredicted RBP15.63■□□□□ 0.09
SSU72-203ENST00000378725 TSPAN14Q8NG11 270 aa15.63■□□□□ 0.09
SSU72-203ENST00000378725 ANGPTL6Q8NI99 470 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms