RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 HMGCLL1Q8TB92 370 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 PIK3IP1Q96FE7 263 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 OR8B4Q96RC9 309 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CTDSP1Q9GZU7 261 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 XKRY2A2RUG3 117 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 PLPP2O43688 288 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 INSM1Q01101 510 aaPredicted RBP10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 SCMH1Q96GD3 660 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 MRGPRX4Q96LA9 322 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CAPZBP47756 277 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 PTTG1IPP53801 180 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 ZDHHC22Q8N966 263 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 OR10G3Q8NGC4 313 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 DPH3P1Q9H4G8 78 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CYB5R1Q9UHQ9 305 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 NUP205Q92621 2012 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF638Q14966 1978 aaKnown RBP10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 A0A087WUJ7 227 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 A0A1B0GTH9 108 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CLEC18AA5D8T8 446 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CXCL13O43927 109 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF17P17021 662 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 FGF9P31371 208 aaPredicted RBP10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 THBS4P35443 961 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 C3AR1Q16581 482 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CLEC18CQ8NCF0 446 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 A0A0B4J2E0 115 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 A0A1B0GX12 115 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 FTH1P19P0C7X4 201 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 UCNP55089 124 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 TIGITQ495A1 244 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 IGSF11Q5DX21 431 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 MRPS24Q96EL2 167 aaKnown RBP10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 NXF2Q9GZY0 626 aaKnown RBP10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 SIGLEC7Q9Y286 467 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 CST4P01036 141 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 PNLIPRP2P54317 469 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 PJVKQ0ZLH3 352 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 IQCJQ1A5X6 159 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF793Q6ZN11 406 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 C20orf196Q8IYI0 205 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 C11orf42Q8N5U0 333 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 IL20Q9NYY1 176 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 OR5V1Q9UGF6 321 aa10.72□□□□□ -0.69
PCDHA9-201ENST00000378122 TCRBV16S1A1N1A0A5B0 115 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 VAMP5O95183 116 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 SFT2D2O95562 160 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 PRF1P14222 555 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 CSN1S1P47710 185 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 NAAAQ02083 359 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 OR2Z1Q8NG97 314 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 OR1J1Q8NGS3 322 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 ARHGAP5-AS1Q96IT6 56 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 LIMS3P0CW19 117 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 LIMS4P0CW20 117 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF66Q6ZN08 573 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 CORO2AQ92828 525 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 TMEM230Q96A57 120 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 MARVELD1Q9BSK0 173 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 LRRC61Q9BV99 259 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 PCDHGA9Q9Y5G4 932 aaKnown RBP10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 CTAG2O75638 210 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 CCR5P51681 352 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 KLHDC1Q8N7A1 406 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 EAF1Q96JC9 268 aaPredicted RBP10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 TSPAN32Q96QS1 320 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 PRDM7Q9NQW5 492 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 ZNF391Q9UJN7 358 aa10.71□□□□□ -0.69
PCDHA9-201ENST00000378122 A0A1W2PNV4 684 aa10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF785A8K8V0 405 aa10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 RGS13O14921 159 aa10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 TMEM127O75204 238 aa10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 OR3A4PP47883 348 aa10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 KIAA0040Q15053 153 aa10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 SIPA1L3O60292 1781 aaPredicted RBP10.71□□□□□ -0.7
PCDHA9-201ENST00000378122 IGHV3OR16-12A0A075B7B8 117 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 CD96P40200 585 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 FMODQ06828 376 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 DHRS2Q13268 280 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 GAMTQ14353 236 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ETFDHQ16134 617 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 TMEM37Q8WXS4 190 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 CLDN23Q96B33 292 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ADGRG7Q96K78 797 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 RAB1BQ9H0U4 201 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 MMP24Q9Y5R2 645 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ADAM20O43506 726 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 COX7A2P2O60397 106 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 FUT6P51993 359 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 TCTN1Q2MV58 587 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ARHGEF39Q8N4T4 335 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 POM121Q96HA1 1249 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 RAB18Q9NP72 206 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 YBX1P67809 324 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms