RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
FXN-201ENST00000377270 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
FXN-201ENST00000377270 IGFBP4P22692 258 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 FASLGP48023 281 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 LINC00114Q6XXX2 140 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 FAM89BQ8N5H3 189 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 BCORP1Q8N888 145 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 CLEC1AQ8NC01 280 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 TECTBQ96PL2 329 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 MIEN1Q9BRT3 115 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 PARP11Q9NR21 331 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 OR13C7P0DN81 318 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 ARR3P36575 388 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 GFERP55789 205 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 CNN3Q15417 329 aaKnown RBP13.72□□□□□ -0.21
FXN-201ENST00000377270 PRAMEF17Q5VTA0 474 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 BIVMQ86UB2 503 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 SLC35F2Q8IXU6 374 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 OR1P1Q8NH06 330 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 OR4K13Q8NH42 304 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 PRRT1Q99946 306 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 MKKSQ9NPJ1 570 aaPredicted RBP13.72□□□□□ -0.21
FXN-201ENST00000377270 STEAP1Q9UHE8 339 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
FXN-201ENST00000377270 IGHV5-51A0A0C4DH38 117 aa13.71□□□□□ -0.21
FXN-201ENST00000377270 ANKRD16Q6P6B7 361 aa13.71□□□□□ -0.21
FXN-201ENST00000377270 TMPRSS12Q86WS5 348 aa13.71□□□□□ -0.21
FXN-201ENST00000377270 AGBL5Q8NDL9 886 aa13.71□□□□□ -0.21
FXN-201ENST00000377270 ZBTB8AQ96BR9 441 aa13.71□□□□□ -0.21
FXN-201ENST00000377270 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
FXN-201ENST00000377270 SERINC4A6NH21 518 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 NDUFB2O95178 105 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 HIST1H1CP16403 213 aaKnown RBP13.71□□□□□ -0.22
FXN-201ENST00000377270 ADRA2CP18825 462 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 CD38P28907 300 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 PRSS3P35030 304 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 RIPPLY3P57055 190 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 HSF1Q00613 529 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 FUT7Q11130 342 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 SCGB2A2Q13296 93 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 ODF1Q14990 250 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 OR51L1Q8NGJ5 315 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 ADAMTS18Q8TE60 1221 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 CSAG2Q9Y5P2 127 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 IER3IP1Q9Y5U9 82 aa13.71□□□□□ -0.22
FXN-201ENST00000377270 ZNF217O75362 1048 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 HLA-AP01891 365 aaKnown RBP13.7□□□□□ -0.22
FXN-201ENST00000377270 GABRA4P48169 554 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 PRRX1P54821 245 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
FXN-201ENST00000377270 DLK1P80370 383 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 SSBP1Q04837 148 aaKnown RBP13.7□□□□□ -0.22
FXN-201ENST00000377270 GAS6Q14393 721 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 WFDC8Q8IUA0 241 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 GALNT16Q8N428 558 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 ZNF615Q8N8J6 731 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 OR2D3Q8NGH3 330 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 FAM174AQ8TBP5 190 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 RPS4Y2Q8TD47 263 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 ZNF775Q96BV0 537 aaPredicted RBP13.7□□□□□ -0.22
FXN-201ENST00000377270 ZNF700Q9H0M5 742 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 ICAM5Q9UMF0 924 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 TRAV18A0A075B6X5 111 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 CTAG2O75638 210 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 TSPAN15O95858 294 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 GPANK1O95872 356 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 LIPCP11150 499 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
FXN-201ENST00000377270 SCAND1P57086 179 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 RAC3P60763 192 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 NR0B2Q15466 257 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 DEFB133Q30KQ1 61 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 SLC22A6Q4U2R8 563 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 GATSQ8NAP1 163 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 OR5L1Q8NGL2 311 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 ZNF587Q96SQ5 575 aaPredicted RBP13.7□□□□□ -0.22
FXN-201ENST00000377270 KLHDC3Q9BQ90 382 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 SCRT1Q9BWW7 348 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 SERTAD3Q9UJW9 196 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 TMEM131Q92545 1883 aa13.7□□□□□ -0.22
FXN-201ENST00000377270 J3KRW8 73 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 CD27P26842 260 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 SNCAP37840 140 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 COMPP49747 757 aaPredicted RBP13.69□□□□□ -0.22
FXN-201ENST00000377270 SULT1A2P50226 295 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 TAS2R19P59542 299 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 TMEM268Q5VZI3 342 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 TMEM104Q8NE00 496 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 STT3BQ8TCJ2 826 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 RPUSD4Q96CM3 377 aaKnown RBP13.69□□□□□ -0.22
FXN-201ENST00000377270 GINS3Q9BRX5 216 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 SLC2A4RGQ9NR83 387 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 LILRA5A6NI73 299 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 TOMM40O96008 361 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 WNT11O96014 354 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 SRFP11831 508 aa13.69□□□□□ -0.22
FXN-201ENST00000377270 EPHA8P29322 1005 aaPredicted RBP13.69□□□□□ -0.22
FXN-201ENST00000377270 NANOS3P60323 173 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms