RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CLPTM1LQ96KA5 538 aa12.05□□□□□ -0.48
HDAC6-204ENST00000376643 CDCA4Q9BXL8 241 aa12.05□□□□□ -0.48
HDAC6-204ENST00000376643 SEMA6AQ9H2E6 1030 aa12.05□□□□□ -0.48
HDAC6-204ENST00000376643 TAS2R1Q9NYW7 299 aa12.05□□□□□ -0.48
HDAC6-204ENST00000376643 TVP23BQ9NYZ1 205 aa12.05□□□□□ -0.48
HDAC6-204ENST00000376643 WNK1Q9H4A3 2382 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 LOC110117498-PIK3R3F6TDL0 507 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 NOS1APO75052 506 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-204ENST00000376643 NXPH2O95156 264 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 IGLV3-1P01715 115 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 KIR2DS4P43632 304 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 HAAOP46952 286 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 CRISP1P54107 249 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 ESRRGP62508 458 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 BCL2L15Q5TBC7 163 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 SLC35E4Q6ICL7 350 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 CCDC54Q8NEL0 328 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 KLHDC2Q9Y2U9 406 aa12.04□□□□□ -0.48
HDAC6-204ENST00000376643 RFPL4AA6NLU0 287 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 ZNF670-ZNF695F2Z2N8 137 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 RFPL4AL1F8VTS6 287 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 GYG2O15488 501 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 FKBP6O75344 327 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 FAHP16930 419 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 PRDX2P32119 198 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 KRTAP10-3P60369 221 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 GID4Q8IVV7 300 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 FGF23Q9GZV9 251 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-204ENST00000376643 PLEKHA1Q9HB21 404 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 PITPNC1Q9UKF7 332 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 SNX5Q9Y5X3 404 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 R4GMQ9 66 aa12.03□□□□□ -0.48
HDAC6-204ENST00000376643 TSPAN15O95858 294 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 RBP4P02753 201 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 MRPL3P09001 348 aaKnown RBP12.02□□□□□ -0.49
HDAC6-204ENST00000376643 T-ENOLP0DO92 83 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 NXNL2Q5VZ03 156 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 ZNF322Q6U7Q0 402 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-204ENST00000376643 MEPCEQ7L2J0 689 aaKnown RBP12.02□□□□□ -0.49
HDAC6-204ENST00000376643 TMEM179BQ7Z7N9 219 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-204ENST00000376643 NRIP2Q9BQI9 281 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 PKIBQ9C010 78 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 ELL3Q9HB65 397 aaPredicted RBP12.02□□□□□ -0.49
HDAC6-204ENST00000376643 ABCB10Q9NRK6 738 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 C19orf12Q9NSK7 152 aa12.02□□□□□ -0.49
HDAC6-204ENST00000376643 TBL2Q9Y4P3 447 aaKnown RBP12.02□□□□□ -0.49
HDAC6-204ENST00000376643 CCDC182A6NF36 153 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 VGLL3A8MV65 326 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 PSMD9O00233 223 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 GATBO75879 557 aaKnown RBP12.01□□□□□ -0.49
HDAC6-204ENST00000376643 TTRP02766 147 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 ALDOBP05062 364 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 PRKACGP22612 351 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 EFNB2P52799 333 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 CXCR4P61073 352 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 IL24Q13007 206 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 PTGES3Q15185 160 aaKnown RBP12.01□□□□□ -0.49
HDAC6-204ENST00000376643 TMEM236Q5W0B7 351 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 TMEM42Q69YG0 159 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 SLC35F2Q8IXU6 374 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 MKXQ8IYA7 352 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 ELMOD2Q8IZ81 293 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 PNKDQ8N490 385 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 OR2T27Q8NH04 317 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 CLN6Q9NWW5 311 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 OR52A1Q9UKL2 312 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 V9GYS6 101 aa12.01□□□□□ -0.49
HDAC6-204ENST00000376643 TCRBV3S1A0A5B6 114 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 PQLC2LA1A4F0 135 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 SERPINA3P01011 423 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 OPN1MWP04001 364 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 TK1P04183 234 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 KRT8P05787 483 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 CHRM2P08172 466 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 OPN1MW2P0DN77 364 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 OPN1MW3P0DN78 364 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 MPZP25189 248 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 HCCSP53701 268 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 PRB3Q04118 309 aaPredicted RBP12□□□□□ -0.49
HDAC6-204ENST00000376643 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 HCP5Q6MZN7 132 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 FAHD1Q6P587 224 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 ASRGL1Q7L266 308 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 REC114Q7Z4M0 266 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 Q8IYB0 196 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 HS3ST5Q8IZT8 346 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 OR4S1Q8NGB4 309 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 RPS4Y2Q8TD47 263 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 C10orf35Q96D05 121 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 ADI1Q9BV57 179 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 HES4Q9HCC6 221 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 KRT84Q9NSB2 600 aa12□□□□□ -0.49
HDAC6-204ENST00000376643 DYNC1I1O14576 645 aa11.99□□□□□ -0.49
HDAC6-204ENST00000376643 XPNPEP2O43895 674 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms