RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 WDFY1Q8IWB7 410 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NAA11Q9BSU3 229 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 P4HTMQ9NXG6 502 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TRAV20A0A0B4J274 112 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 DHHO43323 396 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF735P0CB33 412 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 CXCL12P48061 93 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ARRDC1Q8N5I2 433 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 EMG1Q92979 244 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF285Q96NJ3 590 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OXGR1Q96P68 337 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PRRX2Q99811 253 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 MFRPQ9BY79 579 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SMCO4Q9NRQ5 59 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OBSL1O75147 1896 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SPTAN1Q13813 2472 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ABCA1O95477 2261 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 HLA-HP01893 362 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 HPNP05981 417 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 F2RL1P55085 397 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NDUFA6P56556 154 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 TMEM50BP56557 158 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RIPPLY1Q0D2K3 151 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PRSS54Q6PEW0 395 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SYT13Q7L8C5 426 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OR2G3Q8NGZ4 309 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RPS4Y2Q8TD47 263 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 LIPHQ8WWY8 451 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 AQP3Q92482 292 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 PIGQQ9BRB3 760 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FAM206AQ9NX38 181 aa12.66□□□□□ -0.38
TNFRSF1B-201ENST00000376259 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FAM24AA6NFZ4 105 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 HSPB2A8KAH6 182 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 GEMIN2O14893 280 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NR2C1P13056 603 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 S100A2P29034 98 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 IGLV3-21P80748 117 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NHLH2Q02577 135 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 HSPB2Q16082 182 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 NCMAPQ5T1S8 102 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SPACA9Q96E40 222 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RASL10BQ96S79 203 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SMOC1Q9H4F8 434 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OR6C65A6NJZ3 312 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 DHRS7CA6NNS2 312 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 HMGB3O15347 200 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SCAND1P57086 179 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ACTBL2Q562R1 376 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OR2B11Q5JQS5 317 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 FNDC7Q5VTL7 733 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 C5orf46Q6UWT4 87 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 C5orf24Q7Z6I8 188 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 ZNF837Q96EG3 531 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
TNFRSF1B-201ENST00000376259 A0A1W2PPE2 198 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TTLL8A6PVC2 850 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 H7C1Q1 480 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CD37P11049 281 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 P2RY4P51582 365 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PLGLB1Q02325 96 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 AKR1C8PQ5T2L2 129 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TFAP2EQ6VUC0 442 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MAML2Q8IZL2 1156 aaPredicted RBP12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RNF166Q96A37 237 aaPredicted RBP12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 UQCC2Q9BRT2 126 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 PECRQ9BY49 303 aa12.65□□□□□ -0.39
TNFRSF1B-201ENST00000376259 FPR2P25090 351 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 GALNSP34059 522 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RBP2P50120 134 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CARD18P57730 90 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 LTC4SQ16873 150 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 TCEAL6Q6IPX3 200 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 RPUSD3Q6P087 351 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR6S1Q8NH40 331 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ZNF286AQ9HBT8 521 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CADP27708 2225 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 EFNA3P52797 238 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 GRB2P62993 217 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 FABP9Q0Z7S8 132 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 OR5AS1Q8N127 324 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CCDC74BQ96LY2 380 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 NDRG3Q9UGV2 375 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 ST8SIA3O43173 380 aa12.64□□□□□ -0.39
TNFRSF1B-201ENST00000376259 CCL3P10147 92 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms