RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
MSH5-204ENST00000375755 SLC46A1Q96NT5 459 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 S100A13Q99584 98 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 ANAPC10Q9UM13 185 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 MEMO1Q9Y316 297 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 TERTO14746 1132 aaKnown RBP11.36□□□□□ -0.59
MSH5-204ENST00000375755 SCRG1O75711 98 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 IL33O95760 270 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 SOD3P08294 240 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 HSD11B1P28845 292 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 LSM6P62312 80 aaKnown RBP11.36□□□□□ -0.59
MSH5-204ENST00000375755 ZNF674Q2M3X9 581 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 IFI44Q8TCB0 444 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 ADAT3Q96EY9 351 aaPredicted RBP11.36□□□□□ -0.59
MSH5-204ENST00000375755 SPACA5Q96QH8 159 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 PRRX2Q99811 253 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 WWTR1Q9GZV5 400 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 LPAR5Q9H1C0 372 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 UBQLN4Q9NRR5 601 aa11.36□□□□□ -0.59
MSH5-204ENST00000375755 LSM5Q9Y4Y9 91 aaKnown RBP11.36□□□□□ -0.59
MSH5-204ENST00000375755 LOC400499M0QZD8 3231 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 TMEM269A0A1B0GVZ9 245 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 TMEM14DPA8MWL7 114 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 DEDDO75618 318 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 BGLAPP02818 100 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 CXCL1P09341 107 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 G0S2P27469 103 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 SLC26A5P58743 744 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 TRIM61Q5EBN2 209 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 SLC22A24Q8N4F4 322 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 ZNF610Q8N9Z0 462 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 OR5H2Q8NGV7 314 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 ZNF519Q8TB69 540 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 SLC25A36Q96CQ1 311 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 ARV1Q9H2C2 271 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 LUZP4Q9P127 313 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 COA3Q9Y2R0 106 aaPredicted RBP11.35□□□□□ -0.59
MSH5-204ENST00000375755 COL5A1P20908 1838 aaPredicted RBP11.35□□□□□ -0.59
MSH5-204ENST00000375755 DMXL1Q9Y485 3027 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 A0A087X0M5 115 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 A0A1B0GX30 115 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 SEC14L6B5MCN3 397 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 SCDO00767 359 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BKO60814 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 F10P00742 488 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BJP06899 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BOP23527 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BBP33778 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 PPP1CCP36873 323 aaKnown RBP11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BDP58876 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 RPL27P61353 136 aaKnown RBP11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BCP62807 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 ZNF117Q03924 483 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 BIKQ13323 160 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST2H2BEQ16778 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 KHDC3LQ587J8 217 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.35□□□□□ -0.59
MSH5-204ENST00000375755 RHBDD2Q6NTF9 364 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 LINC00346Q8IVM7 164 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 OR1N1Q8NGS0 311 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 MED12Q93074 2177 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BHQ93079 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 LURAP1Q96LR2 239 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BNQ99877 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H2BMQ99879 126 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 DUSP23Q9BVJ7 150 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 OSGIN2Q9Y236 505 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 LAMA5O15230 3695 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 CFAP47Q6ZTR5 3102 aa11.35□□□□□ -0.59
MSH5-204ENST00000375755 BTBD17A6NE02 478 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 KNG1P01042 644 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 LMO1P25800 156 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 GALNSP34059 522 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 PTGER4P35408 488 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 SLC35A1P78382 337 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 ZNF101Q8IZC7 436 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 Q8WTZ3 238 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 RARRES2Q99969 163 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 TTC28Q96AY4 2481 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 CCDC163A0A0D9SF12 145 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 FRG2CA6NGY1 282 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 ZNF726A6NNF4 738 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 HIST1H1DP16402 221 aaKnown RBP11.34□□□□□ -0.59
MSH5-204ENST00000375755 CHATP28329 748 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 CRABP1P29762 137 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 HOXA6P31267 233 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 TMEM50BP56557 158 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 PKIAP61925 76 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 CHAF1BQ13112 559 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 SOHLH1Q5JUK2 328 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 DCXRQ7Z4W1 244 aa11.34□□□□□ -0.59
MSH5-204ENST00000375755 TMEM156Q8N614 296 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms