RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 SMAD4Q13485 552 aaKnown RBP13.82□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF628Q5EBL2 1059 aa13.82□□□□□ -0.2
GTF3C4-201ENST00000372146 GLIPR2Q9H4G4 154 aa13.82□□□□□ -0.2
GTF3C4-201ENST00000372146 CST5P28325 142 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 HAAOP46952 286 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 RGRP47804 291 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 CST9Q5W186 159 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 H1FNTQ75WM6 255 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 TAS1R1Q7RTX1 841 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 NTNG2Q96CW9 530 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 MS4A3Q96HJ5 214 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 FOXC2Q99958 501 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 PRKRAO75569 313 aaKnown RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 SLC35E2P0CK97 266 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 IZUMO4Q1ZYL8 232 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 MPV17LQ2QL34 196 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 GGTA1PQ4G0N0 100 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 BEND2Q8NDZ0 799 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 OR10G4Q8NGN3 311 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 PLEKHB1Q9UF11 243 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 PSG11Q9UQ72 335 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 MPC2O95563 127 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 MGPP08493 103 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 TMIGD3P0DMS9 266 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 METAP1P53582 386 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 DEFB133Q30KQ1 61 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 LBX2Q6XYB7 198 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 NEIL1Q96FI4 390 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 ADTRPQ96IZ2 230 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 PRRX2Q99811 253 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 WSB2Q9NYS7 404 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 F11RQ9Y624 299 aaKnown RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF840PA6NDX5 716 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 CTSSP25774 331 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF506Q5JVG8 444 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 C1orf140Q5VVS0 124 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 AFMIDQ63HM1 303 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 PRSS38A1L453 326 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 C9orf170A2RU37 121 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 IGHA1P01876 353 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 IGHA2P01877 340 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 SOD2P04179 222 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 ARR3P36575 388 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 RBPMS2Q6ZRY4 209 aaKnown RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 RGP1Q92546 391 aaPredicted RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 EIF1P41567 113 aaKnown RBP13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 DHRS4L2Q6PKH6 230 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 PARM1Q6UWI2 310 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 ROBO4Q8WZ75 1007 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 SFRP2Q96HF1 295 aa13.81□□□□□ -0.2
GTF3C4-201ENST00000372146 TRBV23-1A0A0A0MS06 115 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 TRAV39A0A0B4J263 110 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 PDE6DO43924 150 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 ZBTB25P24278 435 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 EMC6Q9BV81 110 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 NALCNQ8IZF0 1738 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 TGIF2-C20orf24A0A0A6YYL0 155 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 MASP2O00187 686 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 EMC4Q5J8M3 183 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 MARCH3Q86UD3 253 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 GOT1L1Q8NHS2 421 aaPredicted RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 FPR2P25090 351 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 PNLIPRP3Q17RR3 467 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 PAAF1Q9BRP4 392 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 SMCHD1A6NHR9 2005 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 BTF3P20290 206 aaKnown RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 RBPJQ06330 500 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 ATOH8Q96SQ7 321 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 HSPB9Q9BQS6 159 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 SH2D2AQ9NP31 389 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 M0QZ24 198 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 MT-CO3P00414 261 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 RPS4Y1P22090 263 aaKnown RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 C16orf82Q7Z2V1 217 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 SPICQ8N5J4 248 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 HMSDA8MTL9 139 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 VAMP5O95183 116 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 HIST1H1EP10412 219 aaKnown RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 THBS4P35443 961 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 RTN4RL1Q86UN2 441 aaPredicted RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 FLYWCH2Q96CP2 140 aaKnown RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 LRRC3BQ96PB8 259 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 MMP17Q9ULZ9 603 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 TWIST1Q15672 202 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 HES3Q5TGS1 186 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 TRILQ7L0X0 811 aa13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 ZC3H3Q8IXZ2 948 aaKnown RBP13.8□□□□□ -0.2
GTF3C4-201ENST00000372146 SLC17A2O00624 439 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 SLC25A17O43808 307 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 WNT1P04628 370 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 FAM27D1Q5T7N8 215 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 FCRL6Q6DN72 434 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 TRAV1-2A0A0B4J238 106 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 ZNF749O43361 778 aa13.79□□□□□ -0.2
GTF3C4-201ENST00000372146 FCMRO60667 390 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 534.8 ms