RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 OR5B21A6NL26 309 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 SYNGR1O43759 233 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 SELLP14151 372 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 AMY2BP19961 511 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 PRTN3P24158 256 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 DCKP27707 260 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 CFHR2P36980 270 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 CCR9P51686 369 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 GNB2P62879 340 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 DOC2BQ14184 412 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 BPIFB6Q8NFQ5 453 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 OR5T2Q8NGG2 359 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 OR10Z1Q8NGY1 313 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 AQP3Q92482 292 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 ITFG2Q969R8 447 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
SS18L1-202ENST00000370848 C1orf147Q96MC9 270 aaPredicted RBP12.58□□□□□ -0.4
SS18L1-202ENST00000370848 CCL13Q99616 98 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 PDCD1LG2Q9BQ51 273 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 CHST5Q9GZS9 411 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF696Q9H7X3 374 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.4
SS18L1-202ENST00000370848 IGKV1-27A0A075B6S5 117 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 FAM230AA0A1W2PPH8 454 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 C22orf46C9J442 243 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 WIPF1O43516 503 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
SS18L1-202ENST00000370848 ZFPL1O95159 310 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 ATP6V1G2O95670 118 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 LALBAP00709 142 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 ISG15P05161 165 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 HAAOP46952 286 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 GBX2P52951 348 aaPredicted RBP12.57□□□□□ -0.4
SS18L1-202ENST00000370848 PAX8Q06710 450 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 FOXL1Q12952 345 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 WDR25Q64LD2 544 aaPredicted RBP12.57□□□□□ -0.4
SS18L1-202ENST00000370848 AHSA2Q719I0 299 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 NLRC3Q7RTR2 1065 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 ANGPTL5Q86XS5 388 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 FAM216BQ8N7L0 139 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF676Q8N7Q3 588 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
SS18L1-202ENST00000370848 FGGYQ96C11 551 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 TMEM80Q96HE8 168 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 TECTBQ96PL2 329 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 OR5V1Q9UGF6 321 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 EXOSC1Q9Y3B2 195 aaKnown RBP12.57□□□□□ -0.4
SS18L1-202ENST00000370848 AUP1Q9Y679 476 aa12.57□□□□□ -0.4
SS18L1-202ENST00000370848 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 IRGMA1A4Y4 181 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 RNASE1P07998 156 aaKnown RBP12.56□□□□□ -0.4
SS18L1-202ENST00000370848 ST3GAL4Q11206 333 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 MICBQ29980 383 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 STUMQ69YW2 141 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 IZUMO2Q6UXV1 221 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 RNF144BQ7Z419 303 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 CALHM1Q8IU99 346 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 CCDC54Q8NEL0 328 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 OR13C3Q8NGS6 347 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 SGCDQ92629 289 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 PRDM13Q9H4Q3 707 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 DNAJB11Q9UBS4 358 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 CLN8Q9UBY8 286 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF69Q9UC07 566 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 HHLA2Q9UM44 414 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
SS18L1-202ENST00000370848 CMYA5Q8N3K9 4069 aa12.56□□□□□ -0.4
SS18L1-202ENST00000370848 EFCAB10A6NFE3 127 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 H0YJX3 145 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 J3QT63 122 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 TMPRSS2O15393 492 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 GATBO75879 557 aaKnown RBP12.55□□□□□ -0.4
SS18L1-202ENST00000370848 PLATP00750 562 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 PIPP12273 146 aaPredicted RBP12.55□□□□□ -0.4
SS18L1-202ENST00000370848 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF20P17024 532 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 MYL12AP19105 171 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 GLRA1P23415 457 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 C21orf33P30042 268 aaPredicted RBP12.55□□□□□ -0.4
SS18L1-202ENST00000370848 TGM4P49221 684 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 CDK5R1Q15078 307 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 ARMCX4Q5H9R4 360 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 SHISA2Q6UWI4 295 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 SIGLECL1Q8N7X8 197 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 ZFP41Q8N8Y5 198 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF485Q8NCK3 441 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 GATAD2BQ8WXI9 593 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 UPRTQ96BW1 309 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
SS18L1-202ENST00000370848 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 PLCXD1Q9NUJ7 323 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 FKBP14Q9NWM8 211 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 CNOT2Q9NZN8 540 aaKnown RBP12.55□□□□□ -0.4
SS18L1-202ENST00000370848 NLKQ9UBE8 527 aa12.55□□□□□ -0.4
SS18L1-202ENST00000370848 IGHV2-70DA0A0C4DH43 119 aa12.54□□□□□ -0.4
SS18L1-202ENST00000370848 TRBV2A0A0J9YWF9 115 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms