RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ATF6BQ99941 703 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 C1QTNF6Q9BXI9 259 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 RNF121Q9H920 327 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 AKIP1Q9NQ31 210 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC17A5Q9NRA2 495 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TXNL4BQ9NX01 149 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF629Q9UEG4 869 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 OR52A1Q9UKL2 312 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 STUB1Q9UNE7 303 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 DIDO1Q9BTC0 2240 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF462Q96JM2 2506 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ARPC4-TTLL3A0A0A6YYG9 625 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TRBV5-5A0A0J9YX44 114 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 LOC100506127A0A0U1RQW1 187 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 A0A1B0GTI1 187 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 A0A1W2PPK0 400 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ANKRD61A6NGH8 418 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 EEF1E1-BLOC1S5C9J1V9 151 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 P2RY10O00398 339 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 GABRPO00591 440 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 PIN1P1O15428 100 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 EEF1E1O43324 174 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC25A17O43808 307 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 LMX1BO60663 402 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TTRP02766 147 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 CCL2P13500 99 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 GNLYP22749 145 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 GABRA5P31644 462 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ARR3P36575 388 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF121P58317 390 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 TAS2R43P59537 309 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 GRB2P62993 217 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 TGFBR3Q03167 851 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ECH1Q13011 328 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 MRPL28Q13084 256 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 PCGF3Q3KNV8 242 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 FAM27D1Q5T7N8 215 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 C22orf42Q6IC83 251 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 Q6ZNX1 250 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 FAM220AQ7Z4H9 259 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 CEACAM19Q7Z692 300 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 FJX1Q86VR8 437 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ELMOD2Q8IZ81 293 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 PAQR4Q8N4S7 273 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF283Q8N7M2 679 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 OR8B12Q8NGG6 310 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 OR51A4Q8NGJ6 313 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 OR5AK2Q8NH90 309 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 POM121L2Q96KW2 1035 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 LYZL4Q96KX0 146 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 COQ7Q99807 217 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 WACQ9BTA9 647 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC5A7Q9GZV3 580 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 PBOV1Q9GZY1 135 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 HDHD2Q9H0R4 259 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 KCNN2Q9H2S1 579 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 PIGMQ9H3S5 423 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 EXOSC4Q9NPD3 245 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 RSL24D1Q9UHA3 163 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC25A15Q9Y619 301 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 RELNP78509 3460 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ADGRG4Q8IZF6 3080 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 TRBV5-7A0A0A0MS05 114 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 A0A1B0GVG6 124 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 A0A1W2PPW3 197 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 OR5H1A6NKK0 313 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 LOC110117498-PIK3R3F6TDL0 507 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ZNF701M0R085 212 aaPredicted RBP3.04□□□□□ -1.92
MCF2-202ENST00000370573 M0R135 149 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 GPRIN2O60269 458 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 C1QL1O75973 258 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 UBL3O95164 117 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 HLA-DPB1P04440 258 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 SERPINA5P05154 406 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 COX5BP10606 129 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 CBR1P16152 277 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ZNF14P17017 642 aaPredicted RBP3.04□□□□□ -1.92
MCF2-202ENST00000370573 PSMB1P20618 241 aaKnown RBP3.04□□□□□ -1.92
MCF2-202ENST00000370573 PSMA1P25786 263 aaKnown RBP3.04□□□□□ -1.92
MCF2-202ENST00000370573 STOMP27105 288 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 HSD11B1P28845 292 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 FGF9P31371 208 aaPredicted RBP3.04□□□□□ -1.92
MCF2-202ENST00000370573 CCKARP32238 428 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 HTR5AP47898 357 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 MZT1Q08AG7 82 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 GSG1Q2KHT4 349 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ZNF829Q3KNS6 432 aaPredicted RBP3.04□□□□□ -1.92
MCF2-202ENST00000370573 SNAI3Q3KNW1 292 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ACSM3Q53FZ2 586 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 SMUG1Q53HV7 270 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 BCL2L15Q5TBC7 163 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 GDPGP1Q6ZNW5 385 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 COLCA1Q6ZS62 124 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 FAM57BQ71RH2 274 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ZNF843Q8N446 348 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 MS4A15Q8N5U1 240 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 ZNF676Q8N7Q3 588 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 OCC1Q8TAD7 63 aa3.04□□□□□ -1.92
MCF2-202ENST00000370573 OR51E1Q8TCB6 317 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms