RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CHST5Q9GZS9 411 aa16.94■□□□□ 0.3
SMNDC1-201ENST00000369592 CNTD2Q9H8S5 307 aa16.94■□□□□ 0.3
SMNDC1-201ENST00000369592 SMPD3Q9NY59 655 aaPredicted RBP16.94■□□□□ 0.3
SMNDC1-201ENST00000369592 DNAJB11Q9UBS4 358 aa16.94■□□□□ 0.3
SMNDC1-201ENST00000369592 MYRFQ9Y2G1 1151 aa16.94■□□□□ 0.3
SMNDC1-201ENST00000369592 MAB21L2Q9Y586 359 aa16.94■□□□□ 0.3
SMNDC1-201ENST00000369592 IGHV3OR16-10A0A075B7F0 116 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 LOC107986453A0A1B0GWG9 222 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 TMEM89A2RUT3 159 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 TRIM77I1YAP6 450 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 NDUFB3O43676 98 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 UBCP0CG48 685 aaKnown RBP16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 HAAOP46952 286 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 COMPP49747 757 aaPredicted RBP16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 CAV3P56539 151 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 GMFBP60983 142 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 GALEQ14376 348 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 ODF4Q2M2E3 257 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 LPCAT4Q643R3 524 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 FAM220AQ7Z4H9 259 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 CALHM1Q8IU99 346 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 TMIGD2Q96BF3 282 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 MED30Q96HR3 178 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 Q96MT0 163 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 PKIBQ9C010 78 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 KPTNQ9Y664 436 aa16.93■□□□□ 0.3
SMNDC1-201ENST00000369592 IGKV1-27A0A075B6S5 117 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 CENPVL3A0A0U1RRI6 287 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 OR4C45A6NMZ5 311 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 CLDN34H7C241 214 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 TOX4O94842 621 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 ARF6P62330 175 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 IL13RA1P78552 427 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 RAB40BQ12829 278 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 IKZF1Q13422 519 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 LRRC10Q5BKY1 277 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 SYS1Q8N2H4 156 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 ZNF488Q96MN9 340 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 JAM3Q9BX67 310 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 MS4A7Q9GZW8 240 aaPredicted RBP16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 AMBNQ9NP70 447 aa16.92■□□□□ 0.3
SMNDC1-201ENST00000369592 IL24Q13007 206 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 TMEM244Q5VVB8 128 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 CD177Q8N6Q3 437 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 KIR3DL3Q8N743 410 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 PACRGLQ8N7B6 248 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 Q8N7P7 452 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 STMN2Q93045 179 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 ADAT3Q96EY9 351 aaPredicted RBP16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 C4orf36Q96KX1 117 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 PCGF1Q9BSM1 259 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 INPP5EQ9NRR6 644 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 ERVK13-1Q9NX77 482 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 DSCAML1Q8TD84 2053 aa16.91■□□□□ 0.3
SMNDC1-201ENST00000369592 IGKV1-9A0A0C4DH69 117 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 DNAJC9-AS1A6NH13 148 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 NKX6-3A6NJ46 265 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 H3BSH0 61 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 FADS2O95864 444 aaKnown RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 PRTN3P24158 256 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ACTA2P62736 377 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ACTG2P63267 376 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ADARB1P78563 741 aaKnown RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 PDCD1Q15116 288 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ZNF691Q5VV52 312 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 METTL11BQ5VVY1 283 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 METAP1DQ6UB28 335 aaPredicted RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 BRD3OSQ6XYD6 125 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 UTS2BQ765I0 119 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 LHFPL3Q86UP9 236 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ANGPTL5Q86XS5 388 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 OR52I1Q8NGK6 324 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 OR10AC1Q8NH08 325 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 PP6455Q8WZ26 134 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ALG8Q9BVK2 526 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 ISG20L2Q9H9L3 353 aaKnown RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 FGF20Q9NP95 211 aaPredicted RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 C8orf4Q9NR00 106 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 SLC25A10Q9UBX3 287 aaPredicted RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 POLDIP2Q9Y2S7 368 aa16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 RPL36Q9Y3U8 105 aaKnown RBP16.9■□□□□ 0.3
SMNDC1-201ENST00000369592 J3QLW9 94 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 GATBO75879 557 aaKnown RBP16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 LIMS3P0CW19 117 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 LIMS4P0CW20 117 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 ZNF19P17023 458 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 FUT6P51993 359 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 ALKBH1Q13686 389 aaKnown RBP16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 SMN1Q16637 294 aaKnown RBP16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 SMIM21Q3B7S5 101 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 GPR157Q5UAW9 335 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 C1orf122Q6ZSJ8 110 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 ZNRF1Q8ND25 227 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 DNAAF1Q8NEP3 725 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 TNFRSF14Q92956 283 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 ADI1Q9BV57 179 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 UNKLQ9H9P5 680 aaKnown RBP16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 ZMAT3Q9HA38 289 aaKnown RBP16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 PLEKHA1Q9HB21 404 aa16.89■□□□□ 0.29
SMNDC1-201ENST00000369592 MTCH1Q9NZJ7 389 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms