RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ZNF418Q8TF45 676 aaPredicted RBP8.18□□□□□ -1.1
CD48-202ENST00000368046 CYGBQ8WWM9 190 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 TMIGD2Q96BF3 282 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 PELI1Q96FA3 418 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 C4orf36Q96KX1 117 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 DMRTB1Q96MA1 342 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 TECTBQ96PL2 329 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 ALG8Q9BVK2 526 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 JAM3Q9BX67 310 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 ISG20L2Q9H9L3 353 aaKnown RBP8.18□□□□□ -1.1
CD48-202ENST00000368046 PLEKHA1Q9HB21 404 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 DNAJB11Q9UBS4 358 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 NUP50Q9UKX7 468 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 HSPE1-MOB4S4R3N1 261 aa8.18□□□□□ -1.1
CD48-202ENST00000368046 IRGMA1A4Y4 181 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 OR4C45A6NMZ5 311 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 OR2AT4A6NND4 320 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 RNF212BA8MTL3 300 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 H0YAE9 185 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 H3BSH0 61 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 ENSAO43768 121 aaKnown RBP8.17□□□□□ -1.1
CD48-202ENST00000368046 GMFBP60983 142 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 SLC34A1Q06495 639 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 KLF17Q5JT82 389 aaPredicted RBP8.17□□□□□ -1.1
CD48-202ENST00000368046 STUMQ69YW2 141 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 PNLDC1Q8NA58 520 aaKnown RBP8.17□□□□□ -1.1
CD48-202ENST00000368046 POC1AQ8NBT0 407 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 ANGPTL6Q8NI99 470 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 PP6455Q8WZ26 134 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 UPRTQ96BW1 309 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 FGGYQ96C11 551 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 VCXQ9H320 206 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 CNTD2Q9H8S5 307 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 SMURF1Q9HCE7 757 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 SNTG1Q9NSN8 517 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 NLKQ9UBE8 527 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 HHLA2Q9UM44 414 aa8.17□□□□□ -1.1
CD48-202ENST00000368046 LOC107986453A0A1B0GWG9 222 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 FAM230AA0A1W2PPH8 454 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 POM121CA8CG34 1229 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ZNF879B4DU55 563 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 C22orf46C9J442 243 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 J3QT63 122 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 SYNGR1O43759 233 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 FCN3O75636 299 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 GATBO75879 557 aaKnown RBP8.16□□□□□ -1.1
CD48-202ENST00000368046 LIMS3P0CW19 117 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 LIMS4P0CW20 117 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 PGA5P0DJD9 388 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 PSG2P11465 335 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 MPZP25189 248 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 CAPGP40121 348 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 GBX2P52951 348 aaPredicted RBP8.16□□□□□ -1.1
CD48-202ENST00000368046 BPIFB3P59826 476 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 IL13RA1P78552 427 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 IL24Q13007 206 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ATRQ13535 2644 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 LRRC10Q5BKY1 277 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ARMCX4Q5H9R4 360 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 UTS2BQ765I0 119 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ANGPTL5Q86XS5 388 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ZNF676Q8N7Q3 588 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 LY6G5BQ8NDX9 201 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 DNAAF1Q8NEP3 725 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 SPATA3Q8NHX4 192 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 CNIH3Q8TBE1 160 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 ADAT3Q96EY9 351 aaPredicted RBP8.16□□□□□ -1.1
CD48-202ENST00000368046 BORCS8Q96FH0 119 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 TMEM80Q96HE8 168 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 JMJD8Q96S16 334 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 SUCNR1Q9BXA5 334 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 PKIBQ9C010 78 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 CHST5Q9GZS9 411 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 NKX1-2Q9UD57 310 aaPredicted RBP8.16□□□□□ -1.1
CD48-202ENST00000368046 POLDIP2Q9Y2S7 368 aa8.16□□□□□ -1.1
CD48-202ENST00000368046 CAB39Q9Y376 341 aaPredicted RBP8.16□□□□□ -1.1
CD48-202ENST00000368046 IGKV1D-17A0A075B6S4 117 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 A0A1B0GW55 424 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 E9PI62 339 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 H0YJX3 145 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 SIGLEC5O15389 551 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 TOX4O94842 621 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 VENTXO95231 258 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 CCDC159P0C7I6 412 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 DUX4L2P0CJ85 424 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 DUX4L3P0CJ86 424 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 DUX4L4P0CJ87 422 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 DUX4L5P0CJ88 424 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 DUX4L6P0CJ89 424 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 DUX4L7P0CJ90 424 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 PRKACBP22694 351 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 PRDX2P32119 198 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 GABRA2P47869 451 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 RBP2P50120 134 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 ETV1P50549 477 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 ATP1B3P54709 279 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 FGF12P61328 243 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 ERVK11-1P61568 191 aa8.15□□□□□ -1.1
CD48-202ENST00000368046 ARF6P62330 175 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms