RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 OR2Y1Q8NGV0 311 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 CPT1CQ8TCG5 803 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 GPR173Q9NS66 373 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 GSKIPQ9P0R6 139 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 POMT1Q9Y6A1 747 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 CABIN1Q9Y6J0 2220 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 F8W036 122 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 GPR31O00270 319 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 SNAPINO95295 136 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 SFTPBP07988 381 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 DBHP09172 617 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 SRD5A2P31213 254 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 CAV2P51636 162 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 SNAI3Q3KNW1 292 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 ZNF528Q3MIS6 628 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 PMS2CLQ68D20 193 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 DHRS7BQ6IAN0 325 aaPredicted RBP12.46□□□□□ -0.41
CD48-201ENST00000368045 DHRS11Q6UWP2 260 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 OR4A4PQ8NGN8 299 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 OR1F12Q8NHA8 337 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 POM121Q96HA1 1249 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 REEP6Q96HR9 211 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 CYYR1Q96J86 154 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 PLEKHA2Q9HB19 425 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 IL36GQ9NZH8 169 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 PADI1Q9ULC6 663 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 SIT1Q9Y3P8 196 aa12.46□□□□□ -0.41
CD48-201ENST00000368045 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 OR6C6A6NF89 314 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 TERTO14746 1132 aaKnown RBP12.46□□□□□ -0.42
CD48-201ENST00000368045 TNFSF11O14788 317 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 NDUFA2O43678 99 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 DEDDO75618 318 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 JTBO76095 146 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 IGHEP01854 428 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 SULT1A2P50226 295 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 DUSP3P51452 185 aaPredicted RBP12.46□□□□□ -0.42
CD48-201ENST00000368045 ARHGDIBP52566 201 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 GUCA2BQ16661 112 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 TMEM42Q69YG0 159 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 TMEM200AQ86VY9 491 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 LDLRAD3Q86YD5 345 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 HLA-CQ95604 372 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 JSRP1Q96MG2 331 aaPredicted RBP12.46□□□□□ -0.42
CD48-201ENST00000368045 MICU1Q9BPX6 476 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 SRXN1Q9BYN0 137 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 TREM1Q9NP99 234 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 PRELID3BQ9Y3B1 194 aa12.46□□□□□ -0.42
CD48-201ENST00000368045 H7C2Y5 167 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 K7EPK0 472 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 NTN3O00634 580 aaPredicted RBP12.45□□□□□ -0.42
CD48-201ENST00000368045 ACKR3P25106 362 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 CHATP28329 748 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
CD48-201ENST00000368045 RBP2P50120 134 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 B3GALT5-AS1P59052 145 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 RPL7L1Q6DKI1 246 aaKnown RBP12.45□□□□□ -0.42
CD48-201ENST00000368045 H3F3CQ6NXT2 135 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
CD48-201ENST00000368045 FAM71E2Q8N5Q1 922 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 GALNT14Q96FL9 552 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 TECTBQ96PL2 329 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 PRRX2Q99811 253 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 CMSS1Q9BQ75 279 aaKnown RBP12.45□□□□□ -0.42
CD48-201ENST00000368045 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 PARP11Q9NR21 331 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 ZFP57Q9NU63 452 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 AK3Q9UIJ7 227 aa12.45□□□□□ -0.42
CD48-201ENST00000368045 CACNA1EQ15878 2313 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 LRP3O75074 770 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 FCGR3AP08637 254 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 PMELP40967 661 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 FOLR3P41439 243 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 PCBD1P61457 104 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
CD48-201ENST00000368045 DMRTC1Q5HYR2 192 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 RIPPLY2Q5TAB7 128 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 GGNBP1Q5YKI7 109 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 LRTM2Q8N967 370 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 OR10Z1Q8NGY1 313 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 SUCNR1Q9BXA5 334 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 BCO1Q9HAY6 547 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 RHOFQ9HBH0 211 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 ACKR4Q9NPB9 350 aa12.44□□□□□ -0.42
CD48-201ENST00000368045 ASCC3Q8N3C0 2202 aaKnown RBP12.43□□□□□ -0.42
CD48-201ENST00000368045 ZNF728P0DKX0 622 aa12.43□□□□□ -0.42
CD48-201ENST00000368045 ICAM2P13598 275 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms