RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 HHLA2Q9UM44 414 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 TRIM64CA6NLI5 447 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 CST4P01036 141 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
VAMP4-202ENST00000367740 PYCR1P32322 319 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 KDELR2P33947 212 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 INSL3P51460 131 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 FHL3Q13643 280 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 EIF2B1Q14232 305 aaKnown RBP11.47□□□□□ -0.57
VAMP4-202ENST00000367740 KIR2DS1Q14954 304 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 SMIM21Q3B7S5 101 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 NANOGP8Q6NSW7 305 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 SMARCD3Q6STE5 483 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 FAM57BQ71RH2 274 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 RRM2BQ7LG56 351 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 ZDHHC23Q8IYP9 409 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 MREGQ8N565 214 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 ZNRF4Q8WWF5 429 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 AQP3Q92482 292 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 PIGCQ92535 297 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 RNFT2Q96EX2 444 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 CCDC28BQ9BUN5 200 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 TMEM120AQ9BXJ8 343 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 CLEC7AQ9BXN2 247 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 RASL12Q9NYN1 266 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 MOB4Q9Y3A3 225 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 HSPE1-MOB4S4R3N1 261 aa11.47□□□□□ -0.57
VAMP4-202ENST00000367740 UNC119BA6NIH7 251 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 SERPINE3A8MV23 424 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 PRR23D1E9PI22 279 aaPredicted RBP11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ARPC3O15145 178 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 DNAJC8O75937 253 aaPredicted RBP11.46□□□□□ -0.57
VAMP4-202ENST00000367740 PRR23D2P0DMB1 279 aaPredicted RBP11.46□□□□□ -0.57
VAMP4-202ENST00000367740 SLC35B1P78383 322 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 FAM27D1Q5T7N8 215 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF676Q8N7Q3 588 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 FANK1Q8TC84 345 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ZBTB9Q96C00 473 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF714Q96N38 554 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 TMEM133Q9H2Q1 129 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ANKRD19PQ9H560 264 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 SESN1Q9Y6P5 492 aa11.46□□□□□ -0.57
VAMP4-202ENST00000367740 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.58
VAMP4-202ENST00000367740 TMEM120BA0PK00 339 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 SPARCP09486 303 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF121P58317 390 aaPredicted RBP11.45□□□□□ -0.58
VAMP4-202ENST00000367740 GRB2P62993 217 aaKnown RBP11.45□□□□□ -0.58
VAMP4-202ENST00000367740 GNG3P63215 75 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 ERICH5Q6P6B1 374 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 TIGD4Q8IY51 512 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 POC1AQ8NBT0 407 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF671Q8TAW3 534 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 ANP32BQ92688 251 aaKnown RBP11.45□□□□□ -0.58
VAMP4-202ENST00000367740 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
VAMP4-202ENST00000367740 DNAJC27Q9NZQ0 273 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 DPM3Q9P2X0 92 aa11.45□□□□□ -0.58
VAMP4-202ENST00000367740 SIRT4Q9Y6E7 314 aaPredicted RBP11.45□□□□□ -0.58
VAMP4-202ENST00000367740 ZNF732B4DXR9 585 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 K7N7A8 449 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 CCRL2O00421 344 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 GP9P14770 177 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 SPNP16150 400 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
VAMP4-202ENST00000367740 ARHGDIBP52566 201 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 EDDM3BP56851 147 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 VSNL1P62760 191 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 CEP78Q5JTW2 689 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 HAGHLQ6PII5 290 aaPredicted RBP11.44□□□□□ -0.58
VAMP4-202ENST00000367740 STPG2Q8N412 459 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 PROKR2Q8NFJ6 384 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 OR10A2Q9H208 303 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 OR52D1Q9H346 318 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 ISYNA1Q9NPH2 558 aa11.44□□□□□ -0.58
VAMP4-202ENST00000367740 DHRS12A0PJE2 317 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 FXYD1O00168 92 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 HSD11B1P28845 292 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 SLC6A6P31641 620 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 SLC15A1P46059 708 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 FGD3Q5JSP0 725 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 TEX38Q6PEX7 206 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 ZBTB49Q6ZSB9 765 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 SATL1Q86VE3 508 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 DRAM1Q8N682 238 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 OR51L1Q8NGJ5 315 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 GATAD1Q8WUU5 269 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 SPATA25Q9BR10 227 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 IFT27Q9BW83 186 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 RGCCQ9H4X1 137 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 RABEP2Q9H5N1 569 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 BRD7Q9NPI1 651 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 OR14J1Q9UGF5 321 aa11.43□□□□□ -0.58
VAMP4-202ENST00000367740 MMP23AO75900 390 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 BDH1Q02338 343 aa11.42□□□□□ -0.58
VAMP4-202ENST00000367740 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms