RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CHRNA7P36544 502 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 GNB1P62873 340 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SRSF4Q08170 494 aaKnown RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 COX19Q49B96 90 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SLC25A30Q5SVS4 291 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 RPL22L1Q6P5R6 122 aaKnown RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 DPPA3Q6W0C5 159 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 BHLHA15Q7RTS1 189 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 CLEC14AQ86T13 490 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM217Q8N7C4 229 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 FAM181AQ8N9Y4 354 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 SPACA9Q96E40 222 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-206ENST00000367253 DLEC1Q9Y238 1755 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 DOCK1Q14185 1865 aa7.77□□□□□ -1.17
SYNE1-206ENST00000367253 TNFRSF1BP20333 461 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 VDAC1P21796 283 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ERHP84090 104 aaKnown RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 SRSF5Q13243 272 aaKnown RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 RGNQ15493 299 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TIGITQ495A1 244 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ENTPD8Q5MY95 495 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 SLC23A3Q6PIS1 610 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM163Q8TC26 289 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 EDARADDQ8WWZ3 215 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 CCL17Q92583 94 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ISL2Q96A47 359 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 EID2BQ96D98 161 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF281Q9Y2X9 895 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 HDGFL3Q9Y3E1 203 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 PTGDR2Q9Y5Y4 395 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 XKRY2A2RUG3 117 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 C5orf52A6NGY3 159 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 E5RGE8 158 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 DLEU1O43261 78 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 MTNR1BP49286 362 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 UBE2G1P62253 170 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 SLC25A11Q02978 314 aaKnown RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TNFRSF9Q07011 255 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM249Q2WGJ8 235 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 PYCR3Q53H96 274 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM182Q6ZP80 229 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 RBPMS2Q6ZRY4 209 aaKnown RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 DOLPP1Q86YN1 238 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 CLECL1Q8IZS7 167 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TTC9BQ8N6N2 239 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 NECAP1Q8NC96 275 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 OR2T6Q8NHC8 308 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 GNPNAT1Q96EK6 184 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 INPP5KQ9BT40 448 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 LPAR3Q9UBY5 353 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 SSC5DA1L4H1 1573 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 POLR2AP24928 1970 aaKnown RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 RGS13O14921 159 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 FABP2P12104 132 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 OR10J1P30954 320 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ANKRD34AQ69YU3 496 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 OR4C13Q8NGP0 309 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 MS4A3Q96HJ5 214 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 GMPPAQ96IJ6 420 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 COMMD5Q9GZQ3 224 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 LPAR2Q9HBW0 351 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 SLC23A2Q9UGH3 650 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 SLC23A1Q9UHI7 598 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 IER3IP1Q9Y5U9 82 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 AHRRA9YTQ3 701 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 LMX1BO60663 402 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 LINC00614P0C842 121 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 IL24Q13007 206 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 GUCA2BQ16661 112 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF750Q32MQ0 723 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF620Q6ZNG0 422 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.76□□□□□ -1.17
SYNE1-206ENST00000367253 OR10AD1Q8NGE0 317 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 TMED6Q8WW62 240 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 IL17CQ9P0M4 197 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 CLN8Q9UBY8 286 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 CCL26Q9Y258 94 aa7.76□□□□□ -1.17
SYNE1-206ENST00000367253 ASXL3Q9C0F0 2248 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 hADV38S2A0JD32 116 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 A6NNC1 897 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 GPR31O00270 319 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 DEGS1O15121 323 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 GABRA4P48169 554 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 RRN3P1Q2M238 152 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 Q6ZRG5 221 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LGI3Q8N145 548 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 OR51A4Q8NGJ6 313 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 FBXO27Q8NI29 283 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LGALS14Q8TCE9 139 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 EMG1Q92979 244 aaKnown RBP7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM186Q96B77 213 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF764Q96H86 408 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-206ENST00000367253 MSL2Q9HCI7 577 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 BTNL2Q9UIR0 455 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 MEIKINA0A087WXM9 373 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 LOC100289279A0A1B0GTE1 492 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM238C9JI98 176 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 SPRY3O43610 288 aa7.75□□□□□ -1.17
SYNE1-206ENST00000367253 SELENOFO60613 162 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms