RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 UQCC2Q9BRT2 126 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 IGHV3-43A0A0B4J1X8 118 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 A0A0B4J2E0 115 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 A0A1B0GX12 115 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 TRIM77I1YAP6 450 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 EPPINO95925 133 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 PGA3P0DJD8 388 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 IGHV3-43DP0DP04 118 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 GNG4P50150 75 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 RPL30P62888 115 aaKnown RBP14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 LINC00299Q6ZSB3 139 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 NTNG2Q96CW9 530 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 MED30Q96HR3 178 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 HEXA-AS1Q9H8Q6 139 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 PCDHGA9Q9Y5G4 932 aaKnown RBP14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 CLEC12BQ2HXU8 276 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 RNASEKQ6P5S7 137 aaKnown RBP14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 UBALD1Q8TB05 177 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 C12orf10Q9HB07 376 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 ASB1Q9Y576 335 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 H3BMH7 237 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 HOXC4P09017 264 aaPredicted RBP14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 TGIF2LXQ8IUE1 241 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 C2CD4CQ8TF44 421 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 C10orf90Q96M02 699 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 CA10Q9NS85 328 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 TMED3Q9Y3Q3 217 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 TRAPPC1Q9Y5R8 145 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 LAMB4A4D0S4 1761 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 SSC5DA1L4H1 1573 aa14.01□□□□□ -0.17
NUCKS1-201ENST00000367142 CST7O76096 145 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 NKX2-2O95096 273 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 KISS1Q15726 138 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 OR4A4PQ8NGN8 299 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 GOLGA4Q13439 2230 aaKnown RBP14□□□□□ -0.17
NUCKS1-201ENST00000367142 OR5B21A6NL26 309 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 RSRP1Q9BUV0 290 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC17A5Q9NRA2 495 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 DCTDP32321 178 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 DOLPP1Q86YN1 238 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 EVX1P49640 407 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 SPCS3P61009 180 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 TCTN1Q2MV58 587 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 ASB5Q8WWX0 329 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 SLC25A22Q9H936 323 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 MYH7P12883 1935 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 MYH8P13535 1937 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 MMP7P09237 267 aaPredicted RBP14□□□□□ -0.17
NUCKS1-201ENST00000367142 EPXP11678 715 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 PMCHP20382 165 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 HTR1DP28221 377 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 CLDN20P56880 219 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 NHLH1Q02575 133 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 NHLH2Q02577 135 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 CCDC190Q86UF4 302 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 MRGPRDQ8TDS7 321 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 ZNF707Q96C28 371 aaPredicted RBP14□□□□□ -0.17
NUCKS1-201ENST00000367142 MBD1Q9UIS9 605 aaPredicted RBP14□□□□□ -0.17
NUCKS1-201ENST00000367142 MPC1Q9Y5U8 109 aa14□□□□□ -0.17
NUCKS1-201ENST00000367142 NEURL1O76050 574 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 GP2P55259 537 aaKnown RBP13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PAFAH1B2P68402 229 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 TMEM171Q8WVE6 324 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 CHD4Q14839 1912 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PDCD1Q15116 288 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 OR4S2Q8NH73 311 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PPP1R1CQ8WVI7 109 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 VPS25Q9BRG1 176 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 CRISPLD2Q9H0B8 497 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 SMOC1Q9H4F8 434 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PLEKHB1Q9UF11 243 aaPredicted RBP13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 GALNSP34059 522 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 EIF4E3Q8N5X7 224 aaKnown RBP13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 OR1B1Q8NGR6 318 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PRSS3P2Q8NHM4 247 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 UFC1Q9Y3C8 167 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 ACTL6AO96019 429 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 LYRM7Q5U5X0 104 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 NIT2Q9NQR4 276 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PRDM7Q9NQW5 492 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 C3orf85A0A1B0GTC6 90 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 A0A1B0GVG6 124 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 PTGFRP43088 359 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 HTRA4P83105 476 aaPredicted RBP13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 MYEOVQ96EZ4 313 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 SPNS1Q9H2V7 528 aa13.99□□□□□ -0.17
NUCKS1-201ENST00000367142 C21orf140B9A014 251 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 RER1O15258 196 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 FAHD1Q6P587 224 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 GABRG3Q99928 467 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 SAP30LQ9HAJ7 183 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 TMPRSS2O15393 492 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 COX6B1P14854 86 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 CALCRP30988 508 aa13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 LSM11P83369 360 aaKnown RBP eCLIP13.98□□□□□ -0.17
NUCKS1-201ENST00000367142 FMODQ06828 376 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms