RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SPANXN2Q5MJ10 180 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 SSX9Q7RTT3 188 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 PRNTQ86SH4 94 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 CYB561A3Q8NBI2 242 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 ORAOV1Q8WV07 137 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 TRIB3Q96RU7 358 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 GABRG3Q99928 467 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 BPIFA3Q9BQP9 254 aa1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 API5Q9BZZ5 524 aaKnown RBP1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 STMN4Q9H169 189 aaPredicted RBP1.35□□□□□ -2.19
RNU4-28P-201ENST00000364739 ZNF729A6NN14 1252 aaPredicted RBP1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 ISLRO14498 428 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 FFAR1O14842 300 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 PSCAO43653 123 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 AGTP01019 485 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 IGKV1D-33P01593 117 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 IGKV1-33P01594 117 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 ERFP50548 548 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 MTPNP58546 118 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 HMGN5P82970 282 aaKnown RBP1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 ENDOGQ14249 297 aaKnown RBP1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 FBXL19-AS1Q494R0 122 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 KCTD16Q68DU8 428 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 COMTD1Q86VU5 262 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 MSRB3Q8IXL7 192 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 CPNE9Q8IYJ1 553 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 ZNF567Q8N184 647 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 MTG1Q9BT17 334 aaPredicted RBP1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 HIGD2AQ9BW72 106 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 ELOVL6Q9H5J4 265 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 OR51B2Q9Y5P1 312 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 MPDZO75970 2070 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 ATG2BQ96BY7 2078 aa1.34□□□□□ -2.19
RNU4-28P-201ENST00000364739 STRCP1A6NGW2 1772 aa1.34□□□□□ -2.2
RNU4-28P-201ENST00000364739 JCADQ9P266 1359 aa1.34□□□□□ -2.2
RNU4-28P-201ENST00000364739 UPK1BO75841 260 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 HLA-GP17693 338 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 GZMHP20718 246 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 GPR1P46091 355 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 NUDT2P50583 147 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 PAFAH1B2P68402 229 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 IRF8Q02556 426 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 RCN1Q15293 331 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 ELOCQ15369 112 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 CYHR1Q6ZMK1 362 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 NDUFAF7Q7L592 441 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 AMN1Q8IY45 258 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 SLC7A5P1Q8MH63 180 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 CCDC148Q8NFR7 591 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 OR8S1Q8NH09 359 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 JSRP1Q96MG2 331 aaPredicted RBP1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 THTPAQ9BU02 230 aa1.33□□□□□ -2.2
RNU4-28P-201ENST00000364739 LCTP09848 1927 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 A8MWP4 228 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 TACSTD2P09758 323 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 ATP6V0D1P61421 351 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 SLC35A1P78382 337 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 RPL18AQ02543 176 aaKnown RBP1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 DHRS2Q13268 280 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 C5orf64Q2M2E5 130 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 TTC19Q6DKK2 380 aaPredicted RBP1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 BZW1Q7L1Q6 419 aaKnown RBP1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 FAM122BQ7Z309 247 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 DAW1Q8N136 415 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 C8orf31Q8N9H6 132 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 Q8NAQ8 132 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 OR2K2Q8NGT1 345 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 ING5Q8WYH8 240 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 TNFRSF14Q92956 283 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 CACNA1SQ13698 1873 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 DOCK10Q96BY6 2186 aa1.32□□□□□ -2.2
RNU4-28P-201ENST00000364739 OTOFQ9HC10 1997 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 J3QT63 122 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 SIVA1O15304 175 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 NDUFS5O43920 106 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 DNAJB6O75190 326 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 TTC4O95801 387 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 OR4Q2P0C623 313 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 PAX6P26367 422 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 ZNF83P51522 516 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 LINC00303Q3SY05 128 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 Q6ZQT7 251 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 APRG1Q8IVJ8 170 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 OR10D4PQ8NGN7 298 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 OR5H2Q8NGV7 314 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 MRPL20Q9BYC9 149 aaKnown RBP1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 LYRM4Q9HD34 91 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 CD209Q9NNX6 404 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 NMRK1Q9NWW6 199 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 KLF13Q9Y2Y9 288 aaPredicted RBP1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 MROH5Q6ZUA9 1318 aa1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 NPHP4O75161 1426 aaPredicted RBP1.31□□□□□ -2.2
RNU4-28P-201ENST00000364739 A0A075B6Q4 140 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 A0A1W2PRD5 423 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 DHRS3O75911 302 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 CCL23P55773 120 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 RAD51Q06609 339 aa1.3□□□□□ -2.2
RNU4-28P-201ENST00000364739 TRDNQ13061 729 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms