RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MICBQ29980 383 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 ACTBL2Q562R1 376 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 BEX5Q5H9J7 111 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 ARRDC1Q8N5I2 433 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 INO80EQ8NBZ0 244 aaPredicted RBP19.68■□□□□ 0.74
LDB1-201ENST00000361198 SEMA6DQ8NFY4 1073 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 MARCH1Q8TCQ1 289 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 REEP6Q96HR9 211 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 OR2H1Q9GZK4 316 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 WNT5BQ9H1J7 359 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 MBD2Q9UBB5 411 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 NOSIPQ9Y314 301 aaKnown RBP19.68■□□□□ 0.74
LDB1-201ENST00000361198 LCATP04180 440 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 FAM189A2Q15884 450 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 TMEM128Q5BJH2 165 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 KCTD9Q7L273 389 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 TMEM251Q8N6I4 163 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 CCDC54Q8NEL0 328 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 TMEM45BQ96B21 275 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 GPR173Q9NS66 373 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 GHRLQ9UBU3 117 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 GPR132Q9UNW8 380 aa19.68■□□□□ 0.74
LDB1-201ENST00000361198 FAM186AA6NE01 2351 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 PSMB6P28072 239 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 PPIAP62937 165 aaKnown RBP19.67■□□□□ 0.74
LDB1-201ENST00000361198 TRIP6Q15654 476 aaKnown RBP19.67■□□□□ 0.74
LDB1-201ENST00000361198 PNLIPRP3Q17RR3 467 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 KRTAP27-1Q3LI81 207 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 GALNTL5Q7Z4T8 443 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 FAM89BQ8N5H3 189 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 TMEM185AQ8NFB2 350 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 OR51T1Q8NGJ9 327 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 ARPC5LQ9BPX5 153 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 OCSTAMPQ9BR26 566 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 NMES1Q9C002 83 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 C12orf4Q9NQ89 552 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 TAS2R3Q9NYW6 316 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 EP300Q09472 2414 aaPredicted RBP19.67■□□□□ 0.74
LDB1-201ENST00000361198 IGKV3D-15A0A087WSY6 115 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 MFNGO00587 321 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 MRPL33O75394 65 aaKnown RBP19.67■□□□□ 0.74
LDB1-201ENST00000361198 ZNF708P17019 499 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 SERPINA2P20848 420 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 ATP1A1-AS1Q5TC04 95 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 TMEM17Q86X19 198 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 FAM117AQ9C073 453 aa19.67■□□□□ 0.74
LDB1-201ENST00000361198 CHMP1AQ9HD42 196 aaPredicted RBP19.67■□□□□ 0.74
LDB1-201ENST00000361198 EEF1E1-BLOC1S5C9J1V9 151 aa19.66■□□□□ 0.74
LDB1-201ENST00000361198 APOC3P02656 99 aa19.66■□□□□ 0.74
LDB1-201ENST00000361198 CTRB1P17538 263 aa19.66■□□□□ 0.74
LDB1-201ENST00000361198 CTRB2Q6GPI1 263 aa19.66■□□□□ 0.74
LDB1-201ENST00000361198 IP6K3Q96PC2 410 aa19.66■□□□□ 0.74
LDB1-201ENST00000361198 F8VVB4 439 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 F8VWA3 439 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 CYCSP99999 105 aaKnown RBP19.65■□□□□ 0.74
LDB1-201ENST00000361198 PLGLB1Q02325 96 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 ATRAIDQ6UW56 229 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 OR5AP2Q8NGF4 316 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 STOML3Q8TAV4 291 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 FER1L6-AS2Q96M78 137 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 C5orf66Q9H5L9 145 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 DHRS7CA6NNS2 312 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 F5H0A9 414 aaPredicted RBP19.65■□□□□ 0.74
LDB1-201ENST00000361198 SERPINF1P36955 418 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 PCBD1P61457 104 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 ELP2Q6IA86 826 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 TUSC5Q8IXB3 177 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 S100A13Q99584 98 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 PIGMQ9H3S5 423 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 ELL3Q9HB65 397 aaPredicted RBP19.65■□□□□ 0.74
LDB1-201ENST00000361198 SLC7A10Q9NS82 523 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 OTOGLQ3ZCN5 2332 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 KMT2EQ8IZD2 1858 aa19.65■□□□□ 0.74
LDB1-201ENST00000361198 A0A0B4J2A0 478 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 C5orf51A6NDU8 294 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 FOXI3A8MTJ6 420 aaPredicted RBP19.64■□□□□ 0.74
LDB1-201ENST00000361198 MMP7P09237 267 aaPredicted RBP19.64■□□□□ 0.74
LDB1-201ENST00000361198 FNDC9Q8TBE3 224 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 TMEM230Q96A57 120 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 PIK3IP1Q96FE7 263 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 RNF126Q9BV68 326 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 SHPKQ9UHJ6 478 aa19.64■□□□□ 0.74
LDB1-201ENST00000361198 URB1O60287 2271 aaKnown RBP19.64■□□□□ 0.73
LDB1-201ENST00000361198 TEX13DA0A0J9YY54 714 aaPredicted RBP19.64■□□□□ 0.73
LDB1-201ENST00000361198 SP1P08047 785 aa19.64■□□□□ 0.73
LDB1-201ENST00000361198 TGIF1Q15583 401 aa19.64■□□□□ 0.73
LDB1-201ENST00000361198 PEG10Q86TG7 708 aaKnown RBP19.64■□□□□ 0.73
LDB1-201ENST00000361198 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.64■□□□□ 0.73
LDB1-201ENST00000361198 BLVRBP30043 206 aaPredicted RBP19.63■□□□□ 0.73
LDB1-201ENST00000361198 CBX5P45973 191 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 MEOX1P50221 254 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 MTCP1P56278 107 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 FAM122CQ6P4D5 195 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 UQCC3Q6UW78 93 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 MDS2Q8NDY4 140 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 BPIFCQ8NFQ6 507 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 CALHM2Q9HA72 323 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 CSAG2Q9Y5P2 127 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 ASPMQ8IZT6 3477 aa19.63■□□□□ 0.73
LDB1-201ENST00000361198 FARS2O95363 451 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms