RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ANKLE1Q8NAG6 615 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 STARD4Q96DR4 205 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
VPS13A-203ENST00000360280 MSL2Q9HCI7 577 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 HMSDA8MTL9 139 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 NUDT3O95989 172 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 IGHV3-9P01782 118 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 DHRS2Q13268 280 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 PRDM7Q9NQW5 492 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
VPS13A-203ENST00000360280 TMEM215Q68D42 235 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 TBC1D26Q86UD7 250 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 NOXO1Q8NFA2 376 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 FBLL1A6NHQ2 334 aaKnown RBP8.37□□□□□ -1.07
VPS13A-203ENST00000360280 M0R1B8 84 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 INHBBP09529 407 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 TMEM65Q6PI78 240 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 OR5R1Q8NH85 324 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 A0A1B0GV72 72 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 CA2P00918 260 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 ARSAP15289 507 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 SLC16A13Q7RTY0 426 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 THOC3Q96J01 351 aaKnown RBP8.37□□□□□ -1.07
VPS13A-203ENST00000360280 HLA-DRB3P79483 266 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 C5orf17Q8NAS9 161 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 UNC13CQ8NB66 2214 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 MISP3Q96FF7 219 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 FBXO4Q9UKT5 387 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 THBS4P35443 961 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 PFN3P60673 137 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 VN1R17PQ8TDU5 208 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 CHRNA10Q9GZZ6 450 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 SCN1AP35498 2009 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 FAM221AA4D161 298 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 CCL11P51671 97 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 OR1D5P58170 312 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 MRGPRX4Q96LA9 322 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 RBM14Q96PK6 669 aaKnown RBP8.37□□□□□ -1.07
VPS13A-203ENST00000360280 LAT2Q9GZY6 243 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 C20orf141Q9NUB4 165 aa8.37□□□□□ -1.07
VPS13A-203ENST00000360280 TARM1B6A8C7 271 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 CEACAM3P40198 252 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SLC19A1P41440 591 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 DPPA3Q6W0C5 159 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF740Q8NDX6 193 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 GAGE10A6NGK3 116 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 KIR2DL1P43626 348 aaPredicted RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 KIR2DL2P43627 348 aaPredicted RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 KHDC3LQ587J8 217 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 XKR7Q5GH72 579 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 MBD3L1Q8WWY6 194 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 TBX15Q96SF7 602 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 TINAGL1Q9GZM7 467 aaPredicted RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SLC25A22Q9H936 323 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 H3BNC9 293 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ANKRD55Q3KP44 614 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 Q7L0L9 218 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ZDHHC16Q969W1 377 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 GPA33Q99795 319 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 HINT3Q9NQE9 182 aaKnown RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 C19orf57Q0VDD7 668 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 MICBQ29980 383 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 FGF20Q9NP95 211 aaPredicted RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 TCF21O43680 179 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 NKAIN2Q5VXU1 208 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 KLK11Q9UBX7 282 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 TAPBPO15533 448 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SEMG1P04279 462 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 EMP1P54849 157 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SDF2Q99470 211 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 MYLKQ15746 1914 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ADAM20O43506 726 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 B4GALT3O60512 393 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ZNF253O75346 499 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 HSD17B10Q99714 261 aaKnown RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 IL36GQ9NZH8 169 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 KLF13Q9Y2Y9 288 aaPredicted RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 KIF26BQ2KJY2 2108 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ZC3H12DA2A288 527 aaKnown RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 UBE2L3P68036 154 aaKnown RBP8.36□□□□□ -1.07
VPS13A-203ENST00000360280 DOCK9Q9BZ29 2069 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ONECUT2O95948 504 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SFTPA2Q8IWL1 248 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SFTPA1Q8IWL2 248 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 PIK3IP1Q96FE7 263 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 SPACA5Q96QH8 159 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 TNFSF11O14788 317 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 COL8A1P27658 744 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 BRS3P32247 399 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 METAP1P53582 386 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 DLEU7Q6UYE1 221 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 NKAIN4Q8IVV8 208 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 ROBO4Q8WZ75 1007 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 PDXPQ96GD0 296 aa8.36□□□□□ -1.07
VPS13A-203ENST00000360280 UBTD1Q9HAC8 227 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms