RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PARD6AQ9NPB6 346 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 MRPS28Q9Y2Q9 187 aaKnown RBP13.14□□□□□ -0.31
UBAP1-202ENST00000359544 CDC14BO60729 498 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 C1QL1O75973 258 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 IL2RGP31785 369 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 SLC6A8P48029 635 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 GABRA4P48169 554 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
UBAP1-202ENST00000359544 ERVFRD-1P60508 538 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 DLK1P80370 383 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
UBAP1-202ENST00000359544 LCN10Q6JVE6 187 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 TVP23CQ96ET8 276 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 ADAT3Q96EY9 351 aaPredicted RBP13.14□□□□□ -0.31
UBAP1-202ENST00000359544 RARRES2Q99969 163 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
UBAP1-202ENST00000359544 NDUFAF3Q9BU61 184 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 SUCNR1Q9BXA5 334 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 OR10A5Q9H207 317 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 WFDC1Q9HC57 220 aa13.14□□□□□ -0.31
UBAP1-202ENST00000359544 COA3Q9Y2R0 106 aaPredicted RBP13.14□□□□□ -0.31
UBAP1-202ENST00000359544 TGIF2-C20orf24A0A0A6YYL0 155 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 A8MWP6 167 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 PROB1E7EW31 1015 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SDCBPO00560 298 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 RAD51DO75771 328 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 IGHMP01871 453 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 TRGC1P0CF51 173 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 GPR3P46089 330 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 GLIPR1P48060 266 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SNU13P55769 128 aaKnown RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 OR8G1Q15617 311 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 THADAQ6YHU6 1953 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 OR14K1Q8NGZ2 314 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 JSRP1Q96MG2 331 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SOX7Q9BT81 388 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 ST6GALNAC5Q9BVH7 336 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SLC25A31Q9H0C2 315 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 HS3ST3B1Q9Y662 390 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 URGCP-MRPS24S4R325 110 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 LOC101059948A0A1B0GTJ6 334 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 DVL1O14640 695 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 HSD17B6O14756 317 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 EML2O95834 649 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 APOBEC1P41238 236 aaKnown RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 PMS2CLQ68D20 193 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 DNM1P34Q6PK57 102 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 GALNTL5Q7Z4T8 443 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 APCDD1LQ8NCL9 501 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 BAHD1Q8TBE0 780 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 HPSE2Q8WWQ2 592 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-202ENST00000359544 APOOQ9BUR5 198 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SH3BGRL3Q9H299 93 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 WASF3Q9UPY6 502 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 SPAG17Q6Q759 2223 aa13.13□□□□□ -0.31
UBAP1-202ENST00000359544 C9J4A7 227 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF20P17024 532 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 TMEM50BP56557 158 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 JOSD1Q15040 202 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-202ENST00000359544 CHRFAM7AQ494W8 412 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 KLHL24Q6TFL4 600 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 ZNF429Q86V71 674 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 HSD17B11Q8NBQ5 300 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 MRPL24Q96A35 216 aaKnown RBP13.12□□□□□ -0.31
UBAP1-202ENST00000359544 BSCL2Q96G97 398 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-202ENST00000359544 ARHGAP5-AS1Q96IT6 56 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 CCDC3Q9BQI4 270 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 NIPSNAP3BQ9BS92 247 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 A0A1B0GV50 99 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 B4DEV8 164 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 MPZL1O95297 269 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 MBPP02686 304 aaPredicted RBP13.12□□□□□ -0.31
UBAP1-202ENST00000359544 RAB4AP20338 218 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
UBAP1-202ENST00000359544 PLXDC2Q6UX71 529 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 SLC35E3Q7Z769 313 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 SEMA6DQ8NFY4 1073 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 HIST1H2BLQ99880 126 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 KIAA1456Q9P272 454 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 PITPNC1Q9UKF7 332 aa13.12□□□□□ -0.31
UBAP1-202ENST00000359544 PRSS38A1L453 326 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 CRYM-AS1A6NIL9 109 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 FTCDNL1E5RQL4 147 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 GDF9O60383 454 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 NSA2O95478 260 aaKnown RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 TTRP02766 147 aa13.11□□□□□ -0.31
UBAP1-202ENST00000359544 CTSDP07339 412 aaPredicted RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 RNH1P13489 461 aaKnown RBP13.11□□□□□ -0.31
UBAP1-202ENST00000359544 CASP6P55212 293 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms