RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SYNGR1O43759 233 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 RP2O75695 350 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 RHBDL1O75783 438 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 ADRA2CP18825 462 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 RBMXP38159 391 aaKnown RBP12.85□□□□□ -0.35
TPM1-206ENST00000358278 PMELP40967 661 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 Q5PR19 223 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 GLT8D1Q68CQ7 371 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 RNF144BQ7Z419 303 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 PEG10Q86TG7 708 aaKnown RBP12.85□□□□□ -0.35
TPM1-206ENST00000358278 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 CLVS1Q8IUQ0 354 aaPredicted RBP12.85□□□□□ -0.35
TPM1-206ENST00000358278 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
TPM1-206ENST00000358278 FAM168AQ92567 244 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 METTL17Q9H7H0 456 aaPredicted RBP12.85□□□□□ -0.35
TPM1-206ENST00000358278 DCAF16Q9NXF7 216 aa12.85□□□□□ -0.35
TPM1-206ENST00000358278 AK6Q9Y3D8 172 aaKnown RBP12.85□□□□□ -0.35
TPM1-206ENST00000358278 AKAP9Q99996 3911 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 TMEM178BH3BS89 294 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 PDCD5O14737 125 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 PPIHO43447 177 aaKnown RBP12.84□□□□□ -0.35
TPM1-206ENST00000358278 AKR7A2O43488 359 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 TMEM225BP0DP42 221 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 MPZP25189 248 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 MTNR1BP49286 362 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 GMFBP60983 142 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 IL24Q13007 206 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 MKXQ8IYA7 352 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 TNFAIP8L1Q8WVP5 186 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 TIMD4Q96H15 378 aa12.84□□□□□ -0.35
TPM1-206ENST00000358278 NAA50Q9GZZ1 169 aaKnown RBP12.84□□□□□ -0.35
TPM1-206ENST00000358278 SHISA3A0PJX4 238 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 NOL3O60936 208 aaKnown RBP12.83□□□□□ -0.36
TPM1-206ENST00000358278 GABARAPO95166 117 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 RAB3BP20337 219 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 OR3A4PP47883 348 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 ART1P52961 327 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 DSCR9P59020 149 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 CLEC12BQ2HXU8 276 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 SLC16A12Q6ZSM3 486 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 CDH26Q8IXH8 852 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 OR10Z1Q8NGY1 313 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 OR51F2Q8NH61 342 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 SLAMF9Q96A28 289 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 FOXRED1Q96CU9 486 aaPredicted RBP12.83□□□□□ -0.36
TPM1-206ENST00000358278 S100A13Q99584 98 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 FOXC2Q99958 501 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 UQCC2Q9BRT2 126 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 ELL3Q9HB65 397 aaPredicted RBP12.83□□□□□ -0.36
TPM1-206ENST00000358278 PLGRKTQ9HBL7 147 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 SMURF1Q9HCE7 757 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 NPTNQ9Y639 398 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 CREBBPQ92793 2442 aa12.83□□□□□ -0.36
TPM1-206ENST00000358278 TRAPPC2LH3BP13 241 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ANGPTL7O43827 346 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 GLRA1P23415 457 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 SDC2P34741 201 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 TGFBR1P36897 503 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 CFHR2P36980 270 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 PTGFRP43088 359 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 GPR6P46095 362 aaPredicted RBP12.82□□□□□ -0.36
TPM1-206ENST00000358278 PSMD7P51665 324 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 TMEM33P57088 247 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ZP1P60852 638 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 VBP1P61758 197 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 MXD1Q05195 221 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 BLMHQ13867 455 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 AWAT2Q6E213 333 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 TPRA1Q86W33 373 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 BATF2Q8N1L9 274 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 GCSAMQ8N6F7 178 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 CEP19Q96LK0 163 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 CNTD2Q9H8S5 307 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 V9GY05 133 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 SMIM30A4D0T7 59 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ISPDA4D126 451 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 SRRM5B3KS81 715 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 NDUFS8O00217 210 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 NXPH2O95156 264 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 CDRT1O95170 752 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ZNF205O95201 554 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 PGA5P0DJD9 388 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 FLNAP21333 2647 aaKnown RBP12.82□□□□□ -0.36
TPM1-206ENST00000358278 OR10A3P58181 314 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 NCS1P62166 190 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 HOXA4Q00056 320 aaPredicted RBP12.82□□□□□ -0.36
TPM1-206ENST00000358278 RIN1Q13671 783 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 FAM201AQ5SY85 155 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ZSCAN4Q8NAM6 433 aaPredicted RBP12.82□□□□□ -0.36
TPM1-206ENST00000358278 POC1AQ8NBT0 407 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 RAB2BQ8WUD1 216 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 RAB1CQ92928 201 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ZNF488Q96MN9 340 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 MTCH1Q9NZJ7 389 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 ITGB1BP2Q9UKP3 347 aa12.82□□□□□ -0.36
TPM1-206ENST00000358278 MRPS28Q9Y2Q9 187 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms