RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SPTA1P02549 2419 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF716A6NP11 495 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 K7EM74 188 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 SOCS1O15524 211 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 CXCL13O43927 109 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 SCO1O75880 301 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 CYB561P49447 251 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 PPA1Q15181 289 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 RAB35Q15286 201 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 TMEM128Q5BJH2 165 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 PLAC9Q5JTB6 97 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 ABLIM2Q6H8Q1 611 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 ZNF775Q96BV0 537 aaPredicted RBP12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 ADGRG7Q96K78 797 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 LINC00052Q96N35 136 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 OR10A2Q9H208 303 aa12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 MRPS18CQ9Y3D5 142 aaKnown RBP12.46□□□□□ -0.41
NIPAL3-203ENST00000358028 A0A1W2PP11 408 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 PINLYPA6NC86 204 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 POM121CA8CG34 1229 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 TRAPPC6AO75865 159 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 CEACAM4O75871 244 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 PMP2P02689 132 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 HOXD4P09016 255 aaPredicted RBP12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 DBHP09172 617 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 CST2P09228 141 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 CNR1P21554 472 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 VAMP1P23763 118 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 STARP49675 285 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 TAS2R46P59540 309 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 NCOA6Q14686 2063 aaPredicted RBP12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 MICBQ29980 383 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 MOB3CQ70IA8 216 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 AAED1Q7RTV5 226 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 INO80EQ8NBZ0 244 aaPredicted RBP12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 ROBO4Q8WZ75 1007 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 PSMF1Q92530 271 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 NMES1Q9C002 83 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 SHARPINQ9H0F6 387 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 TP53TG5Q9Y2B4 290 aa12.46□□□□□ -0.42
NIPAL3-203ENST00000358028 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 RNF222A6NCQ9 220 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 MKRN2OSH3BPM6 223 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 CCSO14618 274 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 NAT2P11245 290 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 FAHP16930 419 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 AKR1C4P17516 323 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 CRYGSP22914 178 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 FPR2P25090 351 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 ITGA3P26006 1051 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 GDF1P27539 372 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 NTF4P34130 210 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 ATP1B3P54709 279 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 KISS1Q15726 138 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 SLC38A6Q8IZM9 456 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 ADAD2Q8NCV1 583 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 OR5H2Q8NGV7 314 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 OR10D3Q8NH80 312 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 CPT1CQ8TCG5 803 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 MARCH1Q8TCQ1 289 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 CHST5Q9GZS9 411 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 PIGLQ9Y2B2 252 aa12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 PRRC2CQ9Y520 2896 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-203ENST00000358028 LOC100509620A0A075B734 347 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 SGCEO43556 437 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 CRHP06850 196 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 PLA2G2AP14555 144 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 PSMB6P28072 239 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 PTGFRP43088 359 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 TMEM50BP56557 158 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 UBE2V2Q15819 145 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 PEG10Q86TG7 708 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 SPERTQ8NA61 448 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 CASTOR1Q8WTX7 329 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 SEC22AQ96IW7 307 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 CRLF2Q9HC73 371 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 RAB18Q9NP72 206 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 TUBD1Q9UJT1 453 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
NIPAL3-203ENST00000358028 DHRS7CA6NNS2 312 aa12.43□□□□□ -0.42
NIPAL3-203ENST00000358028 SERPINE3A8MV23 424 aa12.43□□□□□ -0.42
NIPAL3-203ENST00000358028 SYNGR3O43761 229 aa12.43□□□□□ -0.42
NIPAL3-203ENST00000358028 RAD51DO75771 328 aa12.43□□□□□ -0.42
NIPAL3-203ENST00000358028 SFT2D2O95562 160 aa12.43□□□□□ -0.42
NIPAL3-203ENST00000358028 FCGR2AP12318 317 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms