RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 METTL17Q9H7H0 456 aaPredicted RBP12.53□□□□□ -0.4
CCNE1-202ENST00000357943 NEK6Q9HC98 313 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 DLL4Q9NR61 685 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 TMEM106BQ9NUM4 274 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 GSTK1Q9Y2Q3 226 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
CCNE1-202ENST00000357943 MPZP25189 248 aa12.52□□□□□ -0.4
CCNE1-202ENST00000357943 ZNF93P35789 620 aaPredicted RBP12.52□□□□□ -0.4
CCNE1-202ENST00000357943 POU3F4P49335 361 aa12.52□□□□□ -0.4
CCNE1-202ENST00000357943 FAM201AQ5SY85 155 aa12.52□□□□□ -0.4
CCNE1-202ENST00000357943 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.4
CCNE1-202ENST00000357943 LYPD6Q86Y78 171 aa12.52□□□□□ -0.4
CCNE1-202ENST00000357943 GFI1Q99684 422 aa12.52□□□□□ -0.4
CCNE1-202ENST00000357943 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 J3QT63 122 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 AKR7A2O43488 359 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 SPRY1O43609 319 aaPredicted RBP12.51□□□□□ -0.41
CCNE1-202ENST00000357943 MYL9P24844 172 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 ZP1P60852 638 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 PDZK1IP1Q13113 114 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 ZNF181Q2M3W8 571 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 BATF2Q8N1L9 274 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 JAGN1Q8N5M9 183 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 GCSAMQ8N6F7 178 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 NKAIN3Q8N8D7 197 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 ZNF488Q96MN9 340 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 KCTD7Q96MP8 289 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 GPER1Q99527 375 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 CHODLQ9H9P2 273 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 RNF7Q9UBF6 113 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 SMIM30A4D0T7 59 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 MEGF11A6BM72 1044 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 CYSRT1A8MQ03 144 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 TMEM178BH3BS89 294 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 ANGPTL7O43827 346 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 ZNF205O95201 554 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 IRF2P14316 349 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 SDC2P34741 201 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 OR3A4PP47883 348 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 OR10A3P58181 314 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 GMFBP60983 142 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 VBP1P61758 197 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 NCS1P62166 190 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 IL24Q13007 206 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 RIN1Q13671 783 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 KRTAP1-3Q8IUG1 177 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 C19orf18Q8NEA5 215 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 PKIBQ9C010 78 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 CNTD2Q9H8S5 307 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 MTCH1Q9NZJ7 389 aa12.51□□□□□ -0.41
CCNE1-202ENST00000357943 CCDC168Q8NDH2 2452 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 DYSFO75923 2080 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 IGKV1-12A0A0C4DH73 117 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 LRRC30A6NM36 301 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 SLC22A1O15245 554 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 LHBP01229 141 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 IGKV1D-12P01611 117 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 EGR1P18146 543 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 CFHR2P36980 270 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 MTNR1BP49286 362 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 PDLIM4P50479 330 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 MXD1Q05195 221 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 SPCS2Q15005 226 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 Q5PR19 223 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 CLEC2AQ6UVW9 174 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 DNM1P46Q6ZS02 220 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 NR2C2APQ86WQ0 139 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 BOLLQ8N9W6 283 aaKnown RBP12.5□□□□□ -0.41
CCNE1-202ENST00000357943 OR11L1Q8NGX0 322 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 TNFAIP8L1Q8WVP5 186 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 HPS1Q92902 700 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 SLAMF9Q96A28 289 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 SEH1LQ96EE3 360 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 CPNE2Q96FN4 548 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-202ENST00000357943 WDR13Q9H1Z4 485 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-202ENST00000357943 POLDIP2Q9Y2S7 368 aa12.5□□□□□ -0.41
CCNE1-202ENST00000357943 SRRM5B3KS81 715 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 CLDN25C9JDP6 229 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 F8VVB4 439 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 F8VWA3 439 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 WNT9BO14905 357 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 PPIHO43447 177 aaKnown RBP12.49□□□□□ -0.41
CCNE1-202ENST00000357943 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 TMEM225BP0DP42 221 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 RAB3BP20337 219 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 PTGFRP43088 359 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 NPBWR2P48146 333 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 TMEM33P57088 247 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 CLEC12BQ2HXU8 276 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 GLT8D1Q68CQ7 371 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 SFRP4Q6FHJ7 346 aaPredicted RBP12.49□□□□□ -0.41
CCNE1-202ENST00000357943 CDH26Q8IXH8 852 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 C1orf87Q8N0U7 546 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 PNLDC1Q8NA58 520 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms