RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ST8SIA5O15466 376 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CTAG2O75638 210 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 C1QL1O75973 258 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 TTRP02766 147 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 BLVRBP30043 206 aaPredicted RBP7.87□□□□□ -1.15
UPF2-202ENST00000357604 LPCAT3Q6P1A2 487 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAHD2BQ6P2I3 314 aaPredicted RBP7.87□□□□□ -1.15
UPF2-202ENST00000357604 OR14K1Q8NGZ2 314 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAHD2AQ96GK7 314 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 SNX22Q96L94 193 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 MCUBQ9NWR8 336 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 ST3GAL6Q9Y274 331 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 OTOGLQ3ZCN5 2332 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 MEIKINA0A087WXM9 373 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 hCG_38984A0A1B0GV85 526 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A10PA6NDY2 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A18PA6NE21 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A16PA6NEW6 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A20PA6NIJ5 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A8PA6NJQ4 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A7PA6NKC0 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A22PA8MWA6 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A12PA8MX19 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A5PA8MXJ8 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A23PA8MXZ1 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CDIPTO14735 213 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 SPRY1O43609 319 aaPredicted RBP7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A15PP0C7V4 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A13PP0C7W8 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A14PP0C7W9 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FAM90A24PP0C7X0 464 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 ECI1P42126 302 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CATR1Q13166 79 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 SNAI3Q3KNW1 292 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 ZNF837Q96EG3 531 aaPredicted RBP7.87□□□□□ -1.15
UPF2-202ENST00000357604 GPN1Q9HCN4 374 aaPredicted RBP7.87□□□□□ -1.15
UPF2-202ENST00000357604 IGKV1D-43A0A0B4J1Z2 117 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 WBP4O75554 376 aaKnown RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 TK1P04183 234 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 TPBGQ13641 420 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 GPR157Q5UAW9 335 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 ENKURQ8TC29 256 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 ZNF418Q8TF45 676 aaPredicted RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 APH1BQ8WW43 257 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 Q96MF0 132 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 REPIN1Q9BWE0 567 aaKnown RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 KLHDC2Q9Y2U9 406 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 B4DSR2 109 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 GYPAP02724 150 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 CSF1P09603 554 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 FSTP19883 344 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 VEGFCP49767 419 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 PDCD1Q15116 288 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 CCDC144NLQ6NUI1 221 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 PCSK4Q6UW60 755 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 PRR18Q8N4B5 295 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 URB1O60287 2271 aaKnown RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 LOC100509620A0A075B734 347 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 J3QLI3 93 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 DCTN6O00399 190 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 RBBP9O75884 186 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 CYB5R3P00387 301 aaPredicted RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 JUNBP17275 347 aaPredicted RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 BCL3P20749 454 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 MEF2DQ14814 521 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 HACD4Q5VWC8 232 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 GCSAMQ8N6F7 178 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 KLHDC3Q9BQ90 382 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 DUSP21Q9H596 190 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 FAM186AA6NE01 2351 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 FUT3P21217 361 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 NFYBP25208 207 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 PRDX2P32119 198 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 IL24Q13007 206 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 SYT6Q5T7P8 510 aaPredicted RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 SFRP4Q6FHJ7 346 aaPredicted RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 ZNF782Q6ZMW2 699 aaPredicted RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 MARS2Q96GW9 593 aaKnown RBP7.86□□□□□ -1.15
UPF2-202ENST00000357604 CMTM3Q96MX0 182 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 G6PC2Q9NQR9 355 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 NECAP2Q9NVZ3 263 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 FRRS1LQ9P0K9 344 aa7.86□□□□□ -1.15
UPF2-202ENST00000357604 SHISA9B4DS77 424 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 SLC22A5O76082 557 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 IGHV1-46P01743 117 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 GSTT2P0CG29 244 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 ADIPOQQ15848 244 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 DMKNQ6E0U4 476 aaPredicted RBP7.85□□□□□ -1.15
UPF2-202ENST00000357604 NANPQ8TBE9 248 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 UBE2FQ969M7 185 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 BBC3Q96PG8 261 aaPredicted RBP7.85□□□□□ -1.15
UPF2-202ENST00000357604 MMP27Q9H306 513 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 DPAGT1Q9H3H5 408 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 NPAP1Q9NZP6 1156 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 CD99P14209 185 aa7.85□□□□□ -1.15
UPF2-202ENST00000357604 PRSS3P35030 304 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms