RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TSPAN15O95858 294 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 MT-ATP6P00846 226 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 IL2RAP01589 272 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 RPLP1P05386 114 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 GZMBP10144 247 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 FSTP19883 344 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 BIDP55957 195 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 CSNK2A1P68400 391 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 CLEC2AQ6UVW9 174 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 WDFY1Q8IWB7 410 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 CSNK2A3Q8NEV1 391 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR14K1Q8NGZ2 314 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 ARHGAP5-AS1Q96IT6 56 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 EIF5A2Q9GZV4 153 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 PBOV1Q9GZY1 135 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 PDE7BQ9NP56 450 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 KCNJ16Q9NPI9 418 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 PARP11Q9NR21 331 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 EHFQ9NZC4 300 aa7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 MRPS28Q9Y2Q9 187 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 LSM5Q9Y4Y9 91 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-201ENST00000357235 A0A0A6YYH2 397 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 A6NJ64 397 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 TTRP02766 147 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 HNF1AP20823 631 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 APLNRP35414 380 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 RABIFP47224 123 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 AFF3P51826 1226 aaKnown RBP7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 YPEL5P62699 121 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 IGLV3-21P80748 117 aaPredicted RBP7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 ANKRD55Q3KP44 614 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 Q6ZRG5 221 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 C9orf40Q8IXQ3 194 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 LMX1AQ8TE12 382 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 TMEM59Q9BXS4 323 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 SLC2A8Q9NY64 477 aa7.27□□□□□ -1.24
CDC42SE1-201ENST00000357235 PTPRSQ13332 1948 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 FRG2CA6NGY1 282 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 DVL1O14640 695 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 TGOLN2O43493 480 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 CX3CR1P49238 355 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 FZD2Q14332 565 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 ARSJQ5FYB0 599 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 PLAC9Q5JTB6 97 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 C1orf100Q5SVJ3 147 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 DNM1P34Q6PK57 102 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 ARHGEF39Q8N4T4 335 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 C11orf40Q8WZ69 217 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 MRGPRX4Q96LA9 322 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 CUTCQ9NTM9 273 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 DOCK8Q8NF50 2099 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 A6NNC1 897 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 NME2P1O60361 137 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 DXOO77932 396 aaKnown RBP7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 TRGC2P03986 189 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 HLA-GP17693 338 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 SERPINA2P20848 420 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 CEBPGP53567 150 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 TAS2R31P59538 309 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 GUK1Q16774 197 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 IAH1Q2TAA2 248 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 DEFB133Q30KQ1 61 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 PHF19Q5T6S3 580 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC22A25Q6T423 547 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 GRINAQ7Z429 371 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 HOGA1Q86XE5 327 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR51T1Q8NGJ9 327 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 CDC6Q99741 560 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 NMES1Q9C002 83 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 CBLN4Q9NTU7 201 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 SUSD2Q9UGT4 822 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 AMDHD2Q9Y303 409 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 RHBDD3Q9Y3P4 386 aa7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 PHF3Q92576 2039 aaKnown RBP7.27□□□□□ -1.25
CDC42SE1-201ENST00000357235 SPTY2D1-AS1A0A0U1RR47 76 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 PRAMEF26H0Y7S4 382 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 M0QZK8 103 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 TP53I11O14683 189 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ITGB1BP1O14713 200 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 GGCTO75223 188 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 RAD51DO75771 328 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 GUSBP08236 651 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 GABRG2P18507 467 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR3A1P47881 315 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 SULT1A2P50226 295 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 SNU13P55769 128 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 CARD18P57730 90 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 RSPO4Q2I0M5 234 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 TIPARPQ7Z3E1 657 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ADAMTS18Q8TE60 1221 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF721Q8TF20 911 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ADIPOR1Q96A54 375 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM230Q96A57 120 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 MUCL1Q96DR8 90 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 YPEL4Q96NS1 127 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 LRRC61Q9BV99 259 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 PARD6AQ9NPB6 346 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms