RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAM90A13PP0C7W8 464 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 FAM90A14PP0C7W9 464 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 FAM90A24PP0C7X0 464 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PPIAP62937 165 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 AAED1Q7RTV5 226 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SAP30LQ9HAJ7 183 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 GPR84Q9NQS5 396 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 IGSF23A1L1A6 192 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 GPANK1O95872 356 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CLEC2LP0C7M8 214 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 NTHL1P78549 312 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 RPEL1Q2QD12 228 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ACSM5Q6NUN0 579 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SLC39A5Q6ZMH5 540 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 GHITMQ9H3K2 345 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 GABRQQ9UN88 632 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 NME2P1O60361 137 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TNFRSF1BP20333 461 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CDKN2AP42771 156 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 GPR3P46089 330 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 DHRS7BQ6IAN0 325 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 DOLPP1Q86YN1 238 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 C17orf47Q8NEP4 570 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PSMG3Q9BT73 122 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 MMP25Q9NPA2 562 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SPANXCQ9NY87 97 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 FCN1O00602 326 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SLC10A3P09131 477 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 RAB6CQ53S08 254 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CPEB2Q7Z5Q1 589 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 LURAP1LQ8IV03 231 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 EID2BQ96D98 161 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 Q96M85 177 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PPP6CO00743 305 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SFT2D2O95562 160 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CEBPBP17676 345 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CEBPEQ15744 281 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 FAM181AQ8N9Y4 354 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 OR52N4Q8NGI2 321 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 IL1F10Q8WWZ1 152 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 AQP10Q96PS8 301 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 GPR62Q9BZJ7 368 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF346Q9UL40 294 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CD8AP01732 235 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 C18orf21Q32NC0 220 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM182Q6ZP80 229 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM9BQ9NQ34 198 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 QSER1Q2KHR3 1735 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 FEZF1A0PJY2 475 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 FAM227AF5H4B4 570 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 NGFRP08138 427 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 HIST1H1EP10412 219 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 RPS4Y1P22090 263 aaKnown RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 MMP16P51512 607 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 RBPJQ06330 500 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 RUNX3Q13761 415 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 OR5M10Q6IEU7 315 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 Q6ZN92 141 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 OR5M1Q8NGP8 315 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SLAMF6Q96DU3 332 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM70Q9BUB7 260 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 M0R082 166 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 AKR7A2O43488 359 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF141Q15928 474 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 LAIR1Q6GTX8 287 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM123Q8N131 208 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 VWA8A3KMH1 1905 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF320A2RRD8 509 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CBX7O95931 251 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 NMBP08949 121 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PHLDA2Q53GA4 152 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 Q6ZSR6 202 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PNPLA1Q8N8W4 532 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF845Q96IR2 970 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SH2D2AQ9NP31 389 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SLC22A13Q9Y226 551 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 NTNG1Q9Y2I2 539 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 C9orf170A2RU37 121 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ALG1L2C9J202 215 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 USF1P22415 310 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 MEF2BQ02080 365 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ACKR1Q16570 336 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM99Q8N816 258 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 SFXN3Q9BWM7 321 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 WIPI2Q9Y4P8 454 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 V9GYH0 126 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 F7P08709 466 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PPP1R1AQ13522 171 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM268Q5VZI3 342 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 ZNF813Q6ZN06 617 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 PBOV1Q9GZY1 135 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 TAS2R4Q9NYW5 299 aa5.91□□□□□ -1.46
VPS13B-202ENST00000357162 CLDN12P56749 244 aa5.9□□□□□ -1.46
VPS13B-202ENST00000357162 TMEM207Q6UWW9 146 aa5.9□□□□□ -1.46
VPS13B-202ENST00000357162 FBXW5Q969U6 566 aa5.9□□□□□ -1.46
VPS13B-202ENST00000357162 C4orf45Q96LM5 186 aa5.9□□□□□ -1.46
VPS13B-202ENST00000357162 IL17FQ96PD4 163 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms