RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CLVS2Q5SYC1 327 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PLCXD3Q63HM9 321 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CIARTQ8N365 385 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 GCSAMQ8N6F7 178 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 TMEM104Q8NE00 496 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR1M1Q8NGA1 313 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR13G1Q8NGZ3 307 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PPP1R14BQ96C90 147 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CCL19Q99731 98 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 FAM192AQ9GZU8 254 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ZCCHC4Q9H5U6 513 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SLC7A11Q9UPY5 501 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 A6NHS1 94 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 AIREO43918 545 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PAHP00439 452 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 HCKP08631 526 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CD37P11049 281 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 CFL1P23528 166 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 SSTR2P30874 369 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 FGF9P31371 208 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 CEBPDP49716 269 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 TAS2R43P59537 309 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ZP1P60852 638 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 TNFAIP6P98066 277 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 OR8G1Q15617 311 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 HAGHLQ6PII5 290 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 PAMR1Q6UXH9 720 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 WDR82Q6UXN9 313 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 C5orf24Q7Z6I8 188 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 PEG10Q86TG7 708 aaKnown RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 CLVS1Q8IUQ0 354 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 MS4A15Q8N5U1 240 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 WFDC11Q8NEX6 87 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 SLC25A28Q96A46 364 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 EGLN1Q9GZT9 426 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 ZNF701Q9NV72 531 aaPredicted RBP3.39□□□□□ -1.87
LIG4-201ENST00000356922 STUB1Q9UNE7 303 aa3.39□□□□□ -1.87
LIG4-201ENST00000356922 hCG_2014768A0A024R1R8 64 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 IGHV3OR15-7A0A075B7D8 119 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 MEX3AA1L020 520 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 H3BMQ9 156 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 H7C417 338 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SULT1B1O43704 296 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 RGS9O75916 674 aaPredicted RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 PTBP3O95758 552 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 LHBP01229 141 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SELLP14151 372 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ATF1P18846 271 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DNASE1P24855 282 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PSMA1P25786 263 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 IL2RGP31785 369 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 EFNB2P52799 333 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 MTCP1P56278 107 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 FAM166AQ6J272 317 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 BRICD5Q6PL45 260 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ANKRD13BQ86YJ7 626 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ZDHHC23Q8IYP9 409 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DTX3Q8N9I9 347 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 OR5D14Q8NGL3 314 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 AQP3Q92482 292 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 FCGR1BQ92637 280 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 RAB1BQ9H0U4 201 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 TCF7L1Q9HCS4 588 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SNTG1Q9NSN8 517 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 RBFOX1Q9NWB1 397 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 ENPP5Q9UJA9 477 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 JMJD1CQ15652 2540 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 YLPM1P49750 1951 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 IGHV4-30-2A0A087WSY4 118 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DHRS7CA6NNS2 312 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 F12P00748 615 aaPredicted RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 ADH4P08319 380 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DAOP14920 347 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ATP5J2P56134 94 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SEC61A1P61619 476 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 MRPL28Q13084 256 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 AVPI1Q5T686 147 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 LYPD2Q6UXB3 125 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DNM1P46Q6ZS02 220 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SLC25A26Q70HW3 274 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 UTS2BQ765I0 119 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 OR5A2Q8NGI9 324 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SLAMF9Q96A28 289 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ISOC1Q96CN7 298 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 MS4A5Q9H3V2 200 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 NARFLQ9H6Q4 476 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 SAP30LQ9HAJ7 183 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 C1orf123Q9NWV4 160 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 IL19Q9UHD0 177 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ZNF391Q9UJN7 358 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PCDHB10Q9UN67 800 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PPP1R3CQ9UQK1 317 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 FBN1P35555 2871 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 LRP5LA4QPB2 252 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 TRIM64BA6NI03 449 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 GABARAPO95166 117 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 TUBG1P23258 451 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PTH2RP49190 550 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 POU3F4P49335 361 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms