RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 C7orf61Q8IZ16 206 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 MFSD8Q8NHS3 518 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 TCTEX1D2Q8WW35 142 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 EMG1Q92979 244 aaKnown RBP8.89□□□□□ -0.99
PTPRA-203ENST00000356147 SHDQ96IW2 340 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 OR5B2Q96R09 309 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 PFDN5Q99471 154 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 GGACTQ9BVM4 153 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 PAPOLGQ9BWT3 736 aaKnown RBP8.89□□□□□ -0.99
PTPRA-203ENST00000356147 SCRT1Q9BWW7 348 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 FAM212BQ9NTI7 297 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-203ENST00000356147 METTL1Q9UBP6 276 aaKnown RBP8.89□□□□□ -0.99
PTPRA-203ENST00000356147 STARD10Q9Y365 291 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 OR5H15A6NDH6 313 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF850A8MQ14 1090 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 AP4M1O00189 453 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 ZNHIT1O43257 154 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 IFNA21P01568 189 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 EIF2S3P41091 472 aaKnown RBP8.89□□□□□ -0.99
PTPRA-203ENST00000356147 HSD11B2P80365 405 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 KIAA0141Q14154 515 aaPredicted RBP8.89□□□□□ -0.99
PTPRA-203ENST00000356147 HAGHQ16775 308 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 SCGB3A2Q96PL1 93 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 S100A13Q99584 98 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 C19orf12Q9NSK7 152 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 KLRF1Q9NZS2 232 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 HS3ST3A1Q9Y663 406 aa8.89□□□□□ -0.99
PTPRA-203ENST00000356147 TAAR5O14804 337 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 OR2C1O95371 312 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 KLK3P07288 261 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-203ENST00000356147 POU2F2P09086 479 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 QDPRP09417 244 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 PNLIPP16233 465 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 FBLP22087 321 aaKnown RBP8.88□□□□□ -0.99
PTPRA-203ENST00000356147 S100PP25815 95 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 RPS23P62266 143 aaKnown RBP8.88□□□□□ -0.99
PTPRA-203ENST00000356147 GFI1BQ5VTD9 330 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 CRIP3Q6Q6R5 217 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 P4HA3Q7Z4N8 544 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 ZFP62Q8NB50 900 aaPredicted RBP8.88□□□□□ -0.99
PTPRA-203ENST00000356147 TMEM234Q8WY98 164 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 LYZL4Q96KX0 146 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 PARPBPQ9NWS1 579 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 PADI1Q9ULC6 663 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 ZDHHC8Q9ULC8 765 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 LRP4O75096 1905 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 URB1O60287 2271 aaKnown RBP8.88□□□□□ -0.99
PTPRA-203ENST00000356147 IGHV3-15A0A0B4J1V0 119 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 A0A1W2PQD3 144 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 LIPT2A6NK58 231 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 VSTM2BA6NLU5 285 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 SCGNO76038 276 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 HAAOP46952 286 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 RNF4P78317 190 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 PYY3Q5JQD4 70 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 UEVLDQ8IX04 471 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 C17orf78Q8N4C9 275 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 WDSUB1Q8N9V3 476 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 OR2AE1Q8NHA4 323 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 STT3BQ8TCJ2 826 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 MARS2Q96GW9 593 aaKnown RBP8.88□□□□□ -0.99
PTPRA-203ENST00000356147 COL4A2P08572 1712 aa8.88□□□□□ -0.99
PTPRA-203ENST00000356147 FIGNL2A6NMB9 653 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 IFITM10A6NMD0 228 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 CEACAM18A8MTB9 384 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 PPIHO43447 177 aaKnown RBP8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ONECUT2O95948 504 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 OR5H8P0DN80 308 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 TAS2R46P59540 309 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 SMAD4Q13485 552 aaKnown RBP8.87□□□□□ -0.99
PTPRA-203ENST00000356147 OPN5Q6U736 354 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 MAGT1Q9H0U3 335 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 GPR173Q9NS66 373 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 CD207Q9UJ71 328 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 FAM230AA0A1W2PPH8 454 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 BLACEA4D250 179 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 H0YL77 283 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 DANCRP0C864 163 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 RNF212Q495C1 297 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 OR14K1Q8NGZ2 314 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 MR1Q95460 341 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 PIGQQ9BRB3 760 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF700Q9H0M5 742 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 LUZP4Q9P127 313 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 MMACHCQ9Y4U1 282 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 FAM24AA6NFZ4 105 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 TLCD2A6NGC4 264 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 MDKP21741 143 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-203ENST00000356147 RAB2AP61019 212 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 SLC35A1P78382 337 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 FAM3AP98173 230 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF674Q2M3X9 581 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ABCA11PQ4W5N1 156 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 C4orf17Q53FE4 359 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 SOHLH1Q5JUK2 328 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF383Q8NA42 475 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 RTN4IP1Q8WWV3 396 aaPredicted RBP8.87□□□□□ -0.99
PTPRA-203ENST00000356147 MRPL13Q9BYD1 178 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms