RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SFTPA2Q8IWL1 248 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 LHFPL5Q8TAF8 219 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 RAB18Q9NP72 206 aa10.94□□□□□ -0.66
COLCA1-201ENST00000355430 ALG1L2C9J202 215 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 PDZD11Q5EBL8 140 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CATSPERDQ86XM0 798 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 LIN37Q96GY3 246 aaPredicted RBP10.93□□□□□ -0.66
COLCA1-201ENST00000355430 REEP6Q96HR9 211 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 C5orf49A4QMS7 147 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF724A8MTY0 619 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 TO15178 435 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 SIGLEC5O15389 551 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 ENSAO43768 121 aaKnown RBP10.93□□□□□ -0.66
COLCA1-201ENST00000355430 ADAP1O75689 374 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 ACTL6AO96019 429 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CRYBA1P05813 215 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 AADACP22760 399 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 KIR3DL2P43630 455 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 RAB35Q15286 201 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 SPINK14Q6IE38 97 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 OR5AS1Q8N127 324 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 OR5AP2Q8NGF4 316 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 OR56B2PQ8NGI1 322 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CYB5R1Q9UHQ9 305 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 POLDIP2Q9Y2S7 368 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 STRAPQ9Y3F4 350 aaKnown RBP10.93□□□□□ -0.66
COLCA1-201ENST00000355430 RER1O15258 196 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CDC14BO60729 498 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 HPNP05981 417 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 TNFRSF1AP19438 455 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CSRP1P21291 193 aaKnown RBP10.93□□□□□ -0.66
COLCA1-201ENST00000355430 GPX8Q8TED1 209 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 ATG2BQ96BY7 2078 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CD1AP06126 327 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CD3EP07766 207 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 NMBP08949 121 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 EDN3P14138 238 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 RPP30P78346 268 aaKnown RBP10.93□□□□□ -0.66
COLCA1-201ENST00000355430 HES1Q14469 280 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 SP6Q3SY56 376 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 TMPRSS7Q7RTY8 843 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 RTN4IP1Q8WWV3 396 aaPredicted RBP10.93□□□□□ -0.66
COLCA1-201ENST00000355430 TMPRSS13Q9BYE2 586 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 OSGIN2Q9Y236 505 aa10.93□□□□□ -0.66
COLCA1-201ENST00000355430 CEBPZOSA8MTT3 80 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF705FA8MVS1 300 aaPredicted RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 PIN1P1O15428 100 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 RECKO95980 971 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF705DP0CH99 300 aaPredicted RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF705BP0CI00 300 aaPredicted RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF92Q03936 586 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 KRTCAP3Q53RY4 240 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 GCNT2Q8N0V5 402 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 RCL1Q9Y2P8 373 aaKnown RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 RAB11AP62491 216 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 KHDC1LQ5JSQ8 128 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 CBLN2Q8IUK8 224 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF808Q8N4W9 903 aaPredicted RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ADAD2Q8NCV1 583 aaKnown RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 TM4SF19Q96DZ7 209 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM68Q96MH6 324 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 GNRHR2Q96P88 292 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 CDX4O14627 284 aaPredicted RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 SPINT2O43291 252 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 IFNA10P01566 189 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 IFNA4P05014 189 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 HOXD4P09016 255 aaPredicted RBP10.92□□□□□ -0.66
COLCA1-201ENST00000355430 C9orf152Q5JTZ5 239 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ARTNQ5T4W7 220 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF485Q8NCK3 441 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 BHLHE23Q8NDY6 225 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 OR51H1Q8NH63 302 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 RNF212BA8MTL3 300 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 RD3LP0DJH9 198 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 RAB13P51153 203 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 SHBQ15464 509 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 MIDNQ504T8 468 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 FHL5Q5TD97 284 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 LHFPL2Q6ZUX7 228 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 KIRREL1Q96J84 757 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 MAGT1Q9H0U3 335 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 DOCK4Q8N1I0 1966 aa10.92□□□□□ -0.66
COLCA1-201ENST00000355430 TMEM218A2RU14 115 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SERPINE3A8MV23 424 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 KCNAB3O43448 404 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 NRASP01111 189 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 FABP6P51161 128 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SLC25A45Q8N413 288 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 ASB10Q8WXI3 467 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 OR6C6A6NF89 314 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 FAM157BP0CG42 384 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 PTAFRP25105 342 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 ASCL1P50553 236 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 PRSS54Q6PEW0 395 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SLC25A42Q86VD7 318 aa10.91□□□□□ -0.66
COLCA1-201ENST00000355430 SLC22A18ASQ8N1D0 253 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms