RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FOXC1Q12948 553 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 SLC9A3R2Q15599 337 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 CLEC18BQ6UXF7 455 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 GGNQ86UU5 652 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 TMEM200AQ86VY9 491 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 SPAG16Q8N0X2 631 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 OR51E1Q8TCB6 317 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 C1orf147Q96MC9 270 aaPredicted RBP7.52□□□□□ -1.21
TRIM55-204ENST00000353317 CNTNAP3BQ96NU0 1288 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 ACKR4Q9NPB9 350 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 MMP26Q9NRE1 261 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 UQCC1Q9NVA1 299 aa7.52□□□□□ -1.21
TRIM55-204ENST00000353317 FAM166BA8MTA8 275 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF705EA8MWA4 302 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ZNHIT1O43257 154 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 TRAPPC6AO75865 159 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SCGNO76038 276 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SRD5A2P31213 254 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 EIF1P41567 113 aaKnown RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 MAGEA5P43359 124 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 DAP3P51398 398 aaKnown RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 GFRA1P56159 465 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 TMEM50BP56557 158 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SOX8P57073 446 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 TAS2R31P59538 309 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 CYCSP99999 105 aaKnown RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 MFAP5Q13361 173 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 GLIPR1L1Q6UWM5 242 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR6S1Q8NH40 331 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR14L1PQ8NHC6 308 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF775Q96BV0 537 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 IP6K3Q96PC2 410 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 NUDT16L1Q9BRJ7 211 aaKnown RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SCNM1Q9BWG6 230 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SEC11CQ9BY50 192 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 TREM1Q9NP99 234 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ALKBH4Q9NXW9 302 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 FBLN5Q9UBX5 448 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 FAM96BQ9Y3D0 163 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 NCOR2Q9Y618 2525 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 GTF3C1Q12789 2109 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 MED12LQ86YW9 2145 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 A0A087WZY1 265 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 CEACAM18A8MTB9 384 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 TRAF3IP2O43734 574 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 RAD51DO75771 328 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SNAPINO95295 136 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 MPIG6BO95866 241 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SP1P08047 785 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 SLC2A1P11166 492 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 NFYBP25208 207 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 GDF1P27539 372 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR3A4PP47883 348 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 DEFB109BQ30KR1 87 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 GFOD2Q3B7J2 385 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ANKRD55Q3KP44 614 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF585AQ6P3V2 769 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 KLHL24Q6TFL4 600 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 C5orf46Q6UWT4 87 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 PGAP1Q75T13 922 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR51F2Q8NH61 342 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 RAB3CQ96E17 227 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR10C1Q96KK4 312 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 C12orf57Q99622 126 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 RTBDNQ9BSG5 229 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 TTTY12Q9BZ98 90 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 HRH4Q9H3N8 390 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 BANF2Q9H503 90 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF703Q9H7S9 590 aaPredicted RBP7.51□□□□□ -1.21
TRIM55-204ENST00000353317 FANCFQ9NPI8 374 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR2S2Q9NQN1 319 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 LPAR3Q9UBY5 353 aa7.51□□□□□ -1.21
TRIM55-204ENST00000353317 OR5H15A6NDH6 313 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 MTRF1O75570 445 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 SFT2D2O95562 160 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 CHRM2P08172 466 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 LYL1P12980 280 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 HIST1H1DP16402 221 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF17P17021 662 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 BIDP55957 195 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 RAC1P63000 192 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 PMP22Q01453 160 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 PJVKQ0ZLH3 352 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 DMRTC1Q5HYR2 192 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 VAX1Q5SQQ9 334 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 PRSS54Q6PEW0 395 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 DRAM2Q6UX65 266 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 OR5AS1Q8N127 324 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ARRDC1Q8N5I2 433 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 TMEM251Q8N6I4 163 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 OR10H5Q8NGA6 315 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF845Q96IR2 970 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ADGRG7Q96K78 797 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 RAB18Q9NP72 206 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ZNF319Q9P2F9 582 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 FBXO9Q9UK97 447 aaPredicted RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 ANAPC10Q9UM13 185 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 B3GALT5Q9Y2C3 310 aa7.5□□□□□ -1.21
TRIM55-204ENST00000353317 MRPS28Q9Y2Q9 187 aaKnown RBP7.5□□□□□ -1.21
TRIM55-204ENST00000353317 LIPGQ9Y5X9 500 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms