RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RGCCQ9H4X1 137 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 LDAHQ9H6V9 325 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 TAS2R3Q9NYW6 316 aa19.26■□□□□ 0.67
UPF3A-201ENST00000351487 MSTNO14793 375 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 FGF16O43320 207 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 SERPINA7P05543 415 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 HTR5AP47898 357 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 CLDN15P56746 228 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 PSG4Q00888 419 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 BTN1A1Q13410 526 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 NKAPLQ5M9Q1 402 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 WIPI1Q5MNZ9 446 aaPredicted RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 C6orf15Q6UXA7 325 aaPredicted RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 LHFPL2Q6ZUX7 228 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 OR10C1Q96KK4 312 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 AQP10Q96PS8 301 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 OR2H1Q9GZK4 316 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 PIGMQ9H3S5 423 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 CYTL1Q9NRR1 136 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 LOXL2Q9Y4K0 774 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 TIMM10BQ9Y5J6 103 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 DOCK10Q96BY6 2186 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 TERTO14746 1132 aaKnown RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 CSTBP04080 98 aaKnown RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 RSU1Q15404 277 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 TIPARPQ7Z3E1 657 aaKnown RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 AKR7LQ8NHP1 331 aa19.25■□□□□ 0.67
UPF3A-201ENST00000351487 MS4A7Q9GZW8 240 aaPredicted RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 METTL8Q9H825 291 aaKnown RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 COLQQ9Y215 455 aaPredicted RBP19.25■□□□□ 0.67
UPF3A-201ENST00000351487 FAM230AA0A1W2PPH8 454 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 ANGPTL7O43827 346 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 PET100P0DJ07 73 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 PTGER4P35408 488 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 CYB561P49447 251 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 RBP2P50120 134 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 PCBD1P61457 104 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 CEACAM16Q2WEN9 425 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 PXDC1Q5TGL8 231 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 HDHD3Q9BSH5 251 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-201ENST00000351487 WNT5BQ9H1J7 359 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 ANXA10Q9UJ72 324 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 hCG_38984A0A1B0GV85 526 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 SPRY1O43609 319 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-201ENST00000351487 CYTIPO60759 359 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 CTSDP07339 412 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-201ENST00000351487 DTYMKP23919 212 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 GFRA1P56159 465 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 ZXDAP98168 799 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 BAP18Q8IXM2 172 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 CCDC36Q8IYA8 594 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 LHFPL5Q8TAF8 219 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 CPNE4Q96A23 557 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-201ENST00000351487 BORCS8Q96FH0 119 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 TMEM100Q9NV29 134 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 OR5AC2Q9NZP5 309 aa19.24■□□□□ 0.67
UPF3A-201ENST00000351487 TRAPPC6AO75865 159 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 UQCC3Q6UW78 93 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 ZBTB44Q8NCP5 570 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 BHLHE23Q8NDY6 225 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 SLC39A7Q92504 469 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 ZPBPQ9BS86 351 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 ZNF2Q9BSG1 426 aaPredicted RBP19.23■□□□□ 0.67
UPF3A-201ENST00000351487 GPR35Q9HC97 309 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 DNAJB11Q9UBS4 358 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 PCDHB10Q9UN67 800 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 PMS2P1A4D2B8 440 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 MSGN1A6NI15 193 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 NRASP01111 189 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 IFNA2P01563 188 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 PATE4P0C8F1 98 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 GDF1P27539 372 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 CHATP28329 748 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 FOXO1Q12778 655 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 STK11Q15831 433 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 TAF9Q16594 264 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 PSMF1Q92530 271 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 C1orf123Q9NWV4 160 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 P4HTMQ9NXG6 502 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 IL36GQ9NZH8 169 aa19.23■□□□□ 0.67
UPF3A-201ENST00000351487 RAB19A4D1S5 217 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 PINLYPA6NC86 204 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 KNG1P01042 644 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 RAB32Q13637 225 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 OR8B8Q15620 311 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 TMEM45BQ96B21 275 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 AK3Q9UIJ7 227 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 MEMO1Q9Y316 297 aa19.22■□□□□ 0.67
UPF3A-201ENST00000351487 RBMXP38159 391 aaKnown RBP19.21■□□□□ 0.67
UPF3A-201ENST00000351487 FAM3AP98173 230 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 NRN1LQ496H8 165 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 DBX2Q6ZNG2 339 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 OR1S2Q8NGQ3 325 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 FGFBP3Q8TAT2 258 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 MARC2Q969Z3 335 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 FAAP24Q9BTP7 215 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 ZNF273Q14593 569 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 SMUG1Q53HV7 270 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 SKA3Q8IX90 412 aa19.21■□□□□ 0.67
UPF3A-201ENST00000351487 ABHD3Q8WU67 409 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms