RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FOXL2NBQ6ZUU3 175 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 CBLN2Q8IUK8 224 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 PUSL1Q8N0Z8 303 aaKnown RBP5.25□□□□□ -1.57
CLCN3-201ENST00000347613 DTWD2Q8NBA8 298 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 AGBL5Q8NDL9 886 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 LHFPL5Q8TAF8 219 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 CCDC107Q8WV48 283 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 EDAQ92838 391 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 MARC2Q969Z3 335 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 PHB2Q99623 299 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 OR10A2Q9H208 303 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 PPA2Q9H2U2 334 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 ASF1BQ9NVP2 202 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 FLVCR1Q9Y5Y0 555 aa5.25□□□□□ -1.57
CLCN3-201ENST00000347613 DIDO1Q9BTC0 2240 aaKnown RBP5.25□□□□□ -1.57
CLCN3-201ENST00000347613 TRBV6-7A0A0A0MS04 114 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 FAM230AA0A1W2PPH8 454 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 TUBAL3A6NHL2 446 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 F5H0A9 414 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 GEMIN2O14893 280 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 FGF16O43320 207 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 DHHO43323 396 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SFT2D2O95562 160 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 EDN3P14138 238 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MSX1P28360 303 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ASCL1P50553 236 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF92Q03936 586 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SNTB1Q13884 538 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF345Q14585 488 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MEF2DQ14814 521 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM128Q5BJH2 165 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 NKAPLQ5M9Q1 402 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 VAX1Q5SQQ9 334 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 C10orf128Q5T292 105 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 NSUN5P2Q63ZY6 315 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 RPL7L1Q6DKI1 246 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 GALNTL5Q7Z4T8 443 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 POC1AQ8NBT0 407 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ADPRHL1Q8NDY3 354 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PSMF1Q92530 271 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ERGIC1Q969X5 290 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MRPL24Q96A35 216 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PRRG4Q9BZD6 226 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 EHFQ9NZC4 300 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 UPB1Q9UBR1 384 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PISDQ9UG56 409 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 AK3Q9UIJ7 227 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 LOC102725191A0A1B0GVB3 256 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 M0R135 149 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 LILRA1O75019 489 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 DHRS3O75911 302 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 CD79AP11912 226 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF708P17019 499 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MSR1P21757 451 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 CSNK1A1P48729 337 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 FHITP49789 147 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF133P52736 654 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PSG4Q00888 419 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 DEFA5Q01523 94 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 CHAF1BQ13112 559 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 RBM39Q14498 530 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PAN3Q58A45 887 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 RAB12Q6IQ22 244 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 DOK3Q7L591 496 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SLC16A14Q7RTX9 510 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SKA3Q8IX90 412 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 OR56B1Q8NGI3 324 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 KCNG3Q8TAE7 436 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 INTS12Q96CB8 462 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF799Q96GE5 643 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 CHST5Q9GZS9 411 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SLC25A32Q9H2D1 315 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 LDAHQ9H6V9 325 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ELL3Q9HB65 397 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 WFDC1Q9HC57 220 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 OR2S2Q9NQN1 319 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF701Q9NV72 531 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 P4HTMQ9NXG6 502 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PLEK2Q9NYT0 353 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 TAS2R3Q9NYW6 316 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 GSKIPQ9P0R6 139 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF107Q9UII5 783 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MED12LQ86YW9 2145 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZZEF1O43149 2961 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 OR2F2O95006 317 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF32P17041 273 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 LPAR6P43657 344 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MLF1P58340 268 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 GMFBP60983 142 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 CSNK2A1P68400 391 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 OR2F1Q13607 317 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 ARFRP1Q13795 201 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 TRIM61Q5EBN2 209 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 PPP1R32Q7Z5V6 425 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 CSNK2A3Q8NEV1 391 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SEMA6DQ8NFY4 1073 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SLC22A8Q8TCC7 542 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 HAS2Q92819 552 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 Q96M66 194 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms