RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 HMGA1P17096 107 aaKnown RBP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 EDDM3BP56851 147 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 LSM11P83369 360 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL12A1-202ENST00000345356 NHLRC2Q8NBF2 726 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 OR2A1Q8NGT9 310 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 VAX2Q9UIW0 290 aa10.82□□□□□ -0.68
COL12A1-202ENST00000345356 MBPP02686 304 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 C11orf40Q8WZ69 217 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 PARD6GQ9BYG4 376 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 MMP25Q9NPA2 562 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 FRRS1LQ9P0K9 344 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 PIAS3Q9Y6X2 628 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 GRPP07492 148 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR5G3P0C626 314 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 THBS4P35443 961 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR3A4PP47883 348 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 SHBQ15464 509 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 CDC20BQ86Y33 519 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR10G4Q8NGN3 311 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR10G7Q8NGN6 311 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 A0A1W2PNR3 127 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF891A8MT65 544 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 TOX3O15405 576 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 PRF1P14222 555 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 PPICP45877 212 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 IL24Q13007 206 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 KISS1Q15726 138 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 AMER3Q8N944 861 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 RAB24Q969Q5 203 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 TP53RKQ96S44 253 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 SH3BGRL2Q9UJC5 107 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 WASHC3Q9Y3C0 194 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 LAMB1P07942 1786 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 RAB29O14966 203 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 ENSAO43768 121 aaKnown RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 CER1O95813 267 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 CSNK1EP49674 416 aaKnown RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 RPS15P62841 145 aaKnown RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 ARG2P78540 354 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 FAM3AP98173 230 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF816Q0VGE8 651 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR4A47Q6IF82 309 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 C20orf196Q8IYI0 205 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 OR5AS1Q8N127 324 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 FBXL14Q8N1E6 418 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 FAAP24Q9BTP7 215 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 RIMS4Q9H426 269 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 MAST2Q6P0Q8 1798 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 LNP1A1A4G5 178 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 PIAS2O75928 621 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 CTSDP07339 412 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 CD82P27701 267 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 GNG4P50150 75 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 EFNB2P52799 333 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF793Q6ZN11 406 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 MRPL24Q96A35 216 aaKnown RBP10.81□□□□□ -0.68
COL12A1-202ENST00000345356 CALHM2Q9HA72 323 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 TBC1D29Q9UFV1 150 aa10.81□□□□□ -0.68
COL12A1-202ENST00000345356 DDX60LQ5H9U9 1706 aaKnown RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 TIMM8AO60220 97 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 FOLR3P41439 243 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 DPTQ07507 201 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 NUFIP2Q7Z417 695 aaKnown RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 CYB561D1Q8N8Q1 229 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 FAM174AQ8TBP5 190 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 SLC25A43Q8WUT9 341 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ANGPTL4Q9BY76 406 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF107Q9UII5 783 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 TRAV8-7A0A075B6U6 113 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 A8MXK9 166 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 DIRC3C9JPN6 131 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 CD1CP29017 333 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 TSPO2Q5TGU0 170 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 JMJD6Q6NYC1 403 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 FAM181AQ8N9Y4 354 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 PP6455Q8WZ26 134 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 LPAR5Q9H1C0 372 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 C1QCP02747 245 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ACAA2P42765 397 aaKnown RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 CDC34P49427 236 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 FAM26DQ5JW98 314 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 RTN4RL1Q86UN2 441 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 VN1R2Q8NFZ6 395 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 GPA33Q99795 319 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 B3GAT1Q9P2W7 334 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ADAM11O75078 769 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 CDAP32320 146 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 H2BFSP57053 126 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 GAMTQ14353 236 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 PDCD1Q15116 288 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ARSJQ5FYB0 599 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-202ENST00000345356 LEMD1Q68G75 181 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 OR10G8Q8NGN5 311 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 OR1P1Q8NH06 330 aa10.8□□□□□ -0.68
COL12A1-202ENST00000345356 ZNF729A6NN14 1252 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-202ENST00000345356 OR5AL1P0C617 328 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms