RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LHFPL1Q86WI0 220 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 TMEM185AQ8NFB2 350 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 ADGRG7Q96K78 797 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 Q96M66 194 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 METTL9Q9H1A3 318 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 GSKIPQ9P0R6 139 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 DOCK7Q96N67 2140 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 FAM221AA4D161 298 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 H0YIZ8 118 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 DNPH1O43598 174 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 SERPINA7P05543 415 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 CELA3AP09093 270 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 M6PRP20645 277 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 MPLP40238 635 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 BTN1A1Q13410 526 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 OVCH2Q7RTZ1 564 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 PEG10Q86TG7 708 aaKnown RBP12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 FOXRED2Q8IWF2 684 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 SKA3Q8IX90 412 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 EMG1Q92979 244 aaKnown RBP12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 RRNAD1Q96FB5 475 aaKnown RBP12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 BORCS8Q96FH0 119 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 ARPC5LQ9BPX5 153 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 WNT5BQ9H1J7 359 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.34
VIPAS39-202ENST00000343765 A0A0B4J2A0 478 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 PIGYQ3MUY2 71 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 ABLIM2Q6H8Q1 611 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 PSMF1Q92530 271 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 OR10C1Q96KK4 312 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 SCGB3A2Q96PL1 93 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 ZNF2Q9BSG1 426 aaPredicted RBP12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 RNF126Q9BV68 326 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 OR2H1Q9GZK4 316 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 GPR35Q9HC97 309 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 FOXJ2Q9P0K8 574 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 SHPKQ9UHJ6 478 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 OR6C6A6NF89 314 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 MSTNO14793 375 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 ZNF92Q03936 586 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 EIF3IQ13347 325 aaKnown RBP12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 SPSB1Q96BD6 273 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 NMES1Q9C002 83 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 OR5AC2Q9NZP5 309 aa12.95□□□□□ -0.34
VIPAS39-202ENST00000343765 CEACAM18A8MTB9 384 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 NRASP01111 189 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 CCNOP22674 350 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 S100A10P60903 97 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 SNTB1Q13884 538 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 CNN3Q15417 329 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 PXDC1Q5TGL8 231 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 RPUSD3Q6P087 351 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 SULF2Q8IWU5 870 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 PIGCQ92535 297 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 SIGLEC12Q96PQ1 595 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 STRADBQ9C0K7 418 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 TAS2R3Q9NYW6 316 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 AK3Q9UIJ7 227 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 C14orf166Q9Y224 244 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 TIMM10BQ9Y5J6 103 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 MSGN1A6NI15 193 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 FAM166BA8MTA8 275 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 C9orf172C9J069 976 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 TSPAN4O14817 238 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 SFTPBP07988 381 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 RBP2P50120 134 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 FOXO1Q12778 655 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 Q6ZSR3 168 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 HSD17B13Q7Z5P4 300 aaPredicted RBP12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 MRPS24Q96EL2 167 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 RAB18Q9NP72 206 aa12.94□□□□□ -0.34
VIPAS39-202ENST00000343765 A0A096LPE4 126 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 A0A1W2PPZ6 126 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 KRBOX1C9JBD0 128 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 GEMIN2O14893 280 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 HOXD4P09016 255 aaPredicted RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 PTGER4P35408 488 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 ARHGDIBP52566 201 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 TSPO2Q5TGU0 170 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 CDCP2Q5VXM1 449 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 PLCXD3Q63HM9 321 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 NARS2Q96I59 477 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 TAAR9Q96RI9 348 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 IGKV1-12A0A0C4DH73 117 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 NUPL2O15504 423 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 IGKV1D-12P01611 117 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 RPS2P15880 293 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 GFRA1P56159 465 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 PPIAP62937 165 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 CYCSP99999 105 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 RAB32Q13637 225 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 PABPC1L2AQ5JQF8 200 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms