RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RTL6Q6ICC9 239 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 ZFP62Q8NB50 900 aaPredicted RBP16.31■□□□□ 0.2
SMPD1-201ENST00000342245 OR52R1Q8NGF1 315 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 IRF7Q92985 503 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 C20orf144Q9BQM9 153 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 MIEN1Q9BRT3 115 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 GSX1Q9H4S2 264 aaPredicted RBP16.31■□□□□ 0.2
SMPD1-201ENST00000342245 NAGKQ9UJ70 344 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 TRAV1-1A0A0B4J248 108 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 PITX3O75364 302 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 IRF2P14316 349 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 GALNSP34059 522 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 SNU13P55769 128 aaKnown RBP16.31■□□□□ 0.2
SMPD1-201ENST00000342245 VAMP2P63027 116 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 PSG6Q00889 435 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 ARL6IP1Q15041 203 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 CHRFAM7AQ494W8 412 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 COL5A1-AS1Q5SY13 56 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 MAML2Q8IZL2 1156 aaPredicted RBP16.31■□□□□ 0.2
SMPD1-201ENST00000342245 LRTM2Q8N967 370 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 DOK4Q8TEW6 326 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 NICN1Q9BSH3 213 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 SDF2L1Q9HCN8 221 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 MRPL22Q9NWU5 206 aaKnown RBP16.31■□□□□ 0.2
SMPD1-201ENST00000342245 SCN2AQ99250 2005 aa16.31■□□□□ 0.2
SMPD1-201ENST00000342245 ZNF732B4DXR9 585 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 FGF17O60258 216 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 CA11O75493 328 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 IGKV1D-16P01601 117 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 MMP7P09237 267 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-201ENST00000342245 ZNF93P35789 620 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-201ENST00000342245 DEFB134Q4QY38 66 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 ZNF66Q6ZN08 573 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 PADI1Q9ULC6 663 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 MED19A0JLT2 244 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-201ENST00000342245 PRSS37A4D1T9 235 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 RRP8O43159 456 aaKnown RBP16.3■□□□□ 0.2
SMPD1-201ENST00000342245 IDH3GP51553 393 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-201ENST00000342245 CDK3Q00526 305 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 ZP2Q05996 745 aa16.3■□□□□ 0.2
SMPD1-201ENST00000342245 CISD1Q9NZ45 108 aaKnown RBP16.3■□□□□ 0.2
SMPD1-201ENST00000342245 A0A0A6YYD4 124 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 A8MXE2 369 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 PLRG1O43660 514 aaKnown RBP16.29■□□□□ 0.2
SMPD1-201ENST00000342245 HPRT1P00492 218 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 CT62P0C5K7 136 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 HIST1H3AP68431 136 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 EWSR1Q01844 656 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMPD1-201ENST00000342245 FAM90A2PQ658T7 463 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 SSX7Q7RTT5 188 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 FBXL14Q8N1E6 418 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 AGBL5Q8NDL9 886 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 TM4SF19Q96DZ7 209 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 P2RX4Q99571 388 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 TMEM59Q9BXS4 323 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 DECR2Q9NUI1 292 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 SOCS1O15524 211 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
SMPD1-201ENST00000342245 MPIG6BO95866 241 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 PEBP1P30086 187 aaKnown RBP16.29■□□□□ 0.2
SMPD1-201ENST00000342245 ST6GALNAC5Q9BVH7 336 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 DNAJC4Q9NNZ3 241 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 MRPS28Q9Y2Q9 187 aaKnown RBP16.29■□□□□ 0.2
SMPD1-201ENST00000342245 KIF26BQ2KJY2 2108 aa16.29■□□□□ 0.2
SMPD1-201ENST00000342245 IGLV1-36A0A0B4J1U3 117 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 B4E171 279 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 SDCBPO00560 298 aaPredicted RBP16.28■□□□□ 0.2
SMPD1-201ENST00000342245 TNFSF10P50591 281 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 GBGT1Q8N5D6 347 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 OIT3Q8WWZ8 545 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 BOD1Q96IK1 185 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 MSL2Q9HCI7 577 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 A0A1W2PN81 502 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 P2RY10O00398 339 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 TSPAN2O60636 221 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 AHSA1O95433 338 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 CEACAM1P13688 526 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 CHRNA7P36544 502 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 GPR3P46089 330 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 OR5I1Q13606 314 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 KCNMB1Q16558 191 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 LEMD1Q68G75 181 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 GLIPR1L1Q6UWM5 242 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 FBXW12Q6X9E4 464 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMPD1-201ENST00000342245 ARRDC3Q96B67 414 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 IMMP2LQ96T52 175 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 OR2J1Q9GZK6 312 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 HEATR5AQ86XA9 2040 aa16.28■□□□□ 0.2
SMPD1-201ENST00000342245 K7EP13 123 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 K7EQS6 105 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 LMX1BO60663 402 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 SLC16A7O60669 478 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 RAD51DO75771 328 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 PFN1P07737 140 aaKnown RBP16.27■□□□□ 0.2
SMPD1-201ENST00000342245 TMEM225BP0DP42 221 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 TMEM50BP56557 158 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 RAB11AP62491 216 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 SMAD4Q13485 552 aaKnown RBP16.27■□□□□ 0.2
SMPD1-201ENST00000342245 NUFIP2Q7Z417 695 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms