RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SLC7A10Q9NS82 523 aa11.45□□□□□ -0.58
COL18A1-201ENST00000342220 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 CSF1P09603 554 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 NR2C1P13056 603 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
COL18A1-201ENST00000342220 MSR1P21757 451 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 ECH1Q13011 328 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 GLYATL3Q5SZD4 288 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 GGNQ86UU5 652 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 OR2AK2Q8NG84 335 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 FAM3DQ96BQ1 224 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 HHLA2Q9UM44 414 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF32P17041 273 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 ASPHD2Q6ICH7 369 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 H3F3CQ6NXT2 135 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 TNFAIP8L1Q8WVP5 186 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 OIT3Q8WWZ8 545 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 ATG5Q9H1Y0 275 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 DMRT1Q9Y5R6 373 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 TMEM272A0A1B0GTI8 110 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 CDRT15L2A8MXV6 281 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 F5H5P2 479 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 LRP3O75074 770 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 PMS2P2O95744 297 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 NPBWR1P48145 328 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 TNFSF10P50591 281 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 B3GALT5-AS1P59052 145 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 NHLH1Q02575 133 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 RAB11BQ15907 218 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF239Q16600 458 aaKnown RBP11.44□□□□□ -0.58
COL18A1-201ENST00000342220 SPATA46Q5T0L3 261 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 PIGTQ969N2 578 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 PBOV1Q9GZY1 135 aa11.44□□□□□ -0.58
COL18A1-201ENST00000342220 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 RAD51DO75771 328 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 LYZL6O75951 148 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 AKAIN1P0CW23 69 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 COX5BP10606 129 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 ACHEP22303 614 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 G0S2P27469 103 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 PRSS3P35030 304 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 SPCS3P61009 180 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 C11orf88Q6PI97 169 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 ZADH2Q8N4Q0 377 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 RNASE11Q8TAA1 199 aaKnown RBP11.43□□□□□ -0.58
COL18A1-201ENST00000342220 C14orf144Q96I85 54 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
COL18A1-201ENST00000342220 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 A0A1W2PPE3 182 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 CALCRP30988 508 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 TAS2R60P59551 318 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 ARF1P84077 181 aaKnown RBP11.43□□□□□ -0.58
COL18A1-201ENST00000342220 DHRS7BQ6IAN0 325 aaPredicted RBP11.43□□□□□ -0.58
COL18A1-201ENST00000342220 NUFIP2Q7Z417 695 aaKnown RBP11.43□□□□□ -0.58
COL18A1-201ENST00000342220 ZIC4Q8N9L1 334 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 DMBX1Q8NFW5 382 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 FOXB1Q99853 325 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 RSRP1Q9BUV0 290 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 TAS2R8Q9NYW2 309 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 PRSS50Q9UI38 385 aa11.43□□□□□ -0.58
COL18A1-201ENST00000342220 RALYQ9UKM9 306 aaKnown RBP11.43□□□□□ -0.58
COL18A1-201ENST00000342220 SPG11Q96JI7 2443 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 INTS1Q8N201 2190 aaKnown RBP11.42□□□□□ -0.58
COL18A1-201ENST00000342220 IGLV3-32A0A0A0MS00 114 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 TMEM218A2RU14 115 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF891A8MT65 544 aaPredicted RBP11.42□□□□□ -0.58
COL18A1-201ENST00000342220 UBE2CO00762 179 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 VAMP5O95183 116 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 FARS2O95363 451 aaKnown RBP11.42□□□□□ -0.58
COL18A1-201ENST00000342220 CYC1P08574 325 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 NQO2P16083 231 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 FAHP16930 419 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 HIKESHIQ53FT3 197 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 ANKRD39Q53RE8 183 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 STEAP1BQ6NZ63 245 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 FGFBP3Q8TAT2 258 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 ASB17Q8WXJ9 295 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 CPNE4Q96A23 557 aaPredicted RBP11.42□□□□□ -0.58
COL18A1-201ENST00000342220 APH1AQ96BI3 265 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 S100PBPQ96BU1 408 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 TREM2Q9NZC2 230 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 PLEKHA6Q9Y2H5 1048 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 CBY1Q9Y3M2 126 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 LOC100289279A0A1B0GTE1 492 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 SLC22A20A6NK97 555 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF878C9JN71 531 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 SLC17A2O00624 439 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 EFSO43281 561 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 EDN3P14138 238 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 SCAND1P57086 179 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 RAB2AP61019 212 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 SORDQ00796 357 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 RNF128Q8TEB7 428 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 PRRX2Q99811 253 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 ZNF319Q9P2F9 582 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 FAM230AA0A1W2PPH8 454 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 LOC390937A0A1W2PQ73 354 aa11.42□□□□□ -0.58
COL18A1-201ENST00000342220 HMSDA8MTL9 139 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms