RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 PKIBQ9C010 78 aa12.88□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
TNFRSF12A-202ENST00000341627 DUSP21Q9H596 190 aa12.88□□□□□ -0.35
TNFRSF12A-202ENST00000341627 OR5V1Q9UGF6 321 aa12.88□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CDC42EP3Q9UKI2 254 aa12.88□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ZNF281Q9Y2X9 895 aa12.88□□□□□ -0.35
TNFRSF12A-202ENST00000341627 A0A0G2JMP0 313 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 A0A0X1KG70 313 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ADAM20O43506 726 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RGS10O43665 173 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RHBDL1O75783 438 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 LALBAP00709 142 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 GYPAP02724 150 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 GATA3P23771 443 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CRHBPP24387 322 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RBP2P50120 134 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 NPY4RP50391 375 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ATP1B3P54709 279 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 GMFBP60983 142 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CR1LQ2VPA4 569 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RBM48Q5RL73 367 aaKnown RBP12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 DMKNQ6E0U4 476 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 LYPD2Q6UXB3 125 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 LHFPL2Q6ZUX7 228 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 PARP16Q8N5Y8 322 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 OR4M2Q8NGB6 313 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 OR5D14Q8NGL3 314 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 GHSRQ92847 366 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 TMIGD2Q96BF3 282 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 MDFIQ99750 246 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 BEX2Q9BXY8 128 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RASSF4Q9H2L5 321 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ZCCHC4Q9H5U6 513 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RASL12Q9NYN1 266 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 COL6A5A8TX70 2615 aa12.87□□□□□ -0.35
TNFRSF12A-202ENST00000341627 PPIAL4CA0A0B4J2A2 164 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 MPZP25189 248 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ZFP36P26651 326 aaKnown RBP12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SOX2P48431 317 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 BDH1Q02338 343 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 IL24Q13007 206 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 YIF1BQ5BJH7 314 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 DCAF12L2Q5VW00 463 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SLC36A1Q7Z2H8 476 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 POC1AQ8NBT0 407 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 OR13C9Q8NGT0 318 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 WDR13Q9H1Z4 485 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 PAK1IP1Q9NWT1 392 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 NLKQ9UBE8 527 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 KAAG1Q9UBP8 84 aa12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 POLR3KQ9Y2Y1 108 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF12A-202ENST00000341627 IGKV1-9A0A0C4DH69 117 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 NKX6-3A6NJ46 265 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 J3QLI3 93 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 TNFRSF13BO14836 293 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 TMPRSS2O15393 492 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 PHF1O43189 567 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SYNGR1O43759 233 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 NOS1APO75052 506 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ALX3O95076 343 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CYB5AP00167 134 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 MT-ND2P03891 347 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ACAA1P09110 424 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 FAM157CP0CG43 387 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 PGA5P0DJD9 388 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 EEF1B2P24534 225 aaKnown RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 MTCP1P56278 107 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ACSM1Q08AH1 577 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SPHARQ15513 63 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SMIM21Q3B7S5 101 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CALHM1Q8IU99 346 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RGP1Q92546 391 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CCDC90BQ9GZT6 254 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 DNTTIP1Q9H147 329 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SNTG1Q9NSN8 517 aa12.85□□□□□ -0.35
TNFRSF12A-202ENST00000341627 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 OR2AT4A6NND4 320 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 SULT1B1O43704 296 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 NXPH2O95156 264 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CD1AP06126 327 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CELP19835 753 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 RAB3AP20336 220 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 IRF3Q14653 427 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 MED22Q15528 200 aa12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 ATPAF1Q5TC12 328 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF12A-202ENST00000341627 CD276Q5ZPR3 534 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms