RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CHATP28329 748 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ATP1B3P54709 279 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SIGIRRQ6IA17 410 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CLEC18BQ6UXF7 455 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SKA3Q8IX90 412 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ALKBH3Q96Q83 286 aaPredicted RBP9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 FOXJ2Q9P0K8 574 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DNAJB11Q9UBS4 358 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PFDN2Q9UHV9 154 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SESN1Q9Y6P5 492 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 IGKV1-27A0A075B6S5 117 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 B8ZZF3 427 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ACTL6AO96019 429 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MT-CO3P00414 261 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 NRASP01111 189 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 B4GALT1P15291 398 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SERPINA2P20848 420 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DLSTP36957 453 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RNPS1Q15287 305 aaKnown RBP9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TCEAL6Q6IPX3 200 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CSNK2A3Q8NEV1 391 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TCEAL3Q969E4 200 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 BORCS8Q96FH0 119 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 VRK1Q99986 396 aaPredicted RBP9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CHMP1AQ9HD42 196 aaPredicted RBP9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RDH8Q9NYR8 311 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MED12Q93074 2177 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 I3L521 148 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MASP2O00187 686 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MRPL33O75394 65 aaKnown RBP9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TRAPPC6AO75865 159 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 LCATP04180 440 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PET100P0DJ07 73 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 AKR1C4P17516 323 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CD82P27701 267 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 UCP3P55916 312 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ELP2Q6IA86 826 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TMEM200AQ86VY9 491 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MDS2Q8NDY4 140 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 FER1L6-AS2Q96M78 137 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SMOC1Q9H4F8 434 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 GPR173Q9NS66 373 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PLEKHJ1Q9NW61 149 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SLC7A11Q9UPY5 501 aa9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 KLF13Q9Y2Y9 288 aaPredicted RBP9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 NOSIPQ9Y314 301 aaKnown RBP9.3□□□□□ -0.92
TRAF3IP2-201ENST00000340026 NME2P1O60361 137 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CST4P01036 141 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SERPINA5P05154 406 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 NME2P22392 152 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 VAMP1P23763 118 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 AVPR2P30518 371 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 STARP49675 285 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PDZK1IP1Q13113 114 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CHRFAM7AQ494W8 412 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PRSS54Q6PEW0 395 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 INO80EQ8NBZ0 244 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ABHD3Q8WU67 409 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 AQP10Q96PS8 301 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 BARX1Q9HBU1 254 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 EHFQ9NZC4 300 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 GLS2Q9UI32 602 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MCTS1Q9ULC4 181 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 J3QW42 95 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CSTBP04080 98 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 EDN3P14138 238 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SERPINF1P36955 418 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RSU1Q15404 277 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OR1C1Q15619 314 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TSPO2Q5TGU0 170 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TMEM211Q6ICI0 200 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SPINK14Q6IE38 97 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ALKAL2Q6UX46 152 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OSR2Q8N2R0 312 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 STPG2Q8N412 459 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 BVESQ8NE79 360 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SLC30A7Q8NEW0 376 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OR5D18Q8NGL1 313 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 GALNT14Q96FL9 552 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 C2orf50Q96LR7 162 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SIGLEC12Q96PQ1 595 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RNF126Q9BV68 326 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TTTY12Q9BZ98 90 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SPEGQ15772 3267 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PMS2P1A4D2B8 440 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SYNGR4O95473 234 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RLN2P04090 185 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZNF806P0C7X5 589 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TMEM225BP0DP42 221 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZNF92Q03936 586 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PAN3Q58A45 887 aaKnown RBP9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 GLRX5Q86SX6 157 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZFP62Q8NB50 900 aaPredicted RBP9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 POC1AQ8NBT0 407 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OR2AE1Q8NHA4 323 aa9.29□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PIK3IP1Q96FE7 263 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms