RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 FAM189A2Q15884 450 aa14.22□□□□□ -0.13
LITAF-201ENST00000339430 SMUG1Q53HV7 270 aa14.22□□□□□ -0.13
LITAF-201ENST00000339430 GALNTL5Q7Z4T8 443 aa14.22□□□□□ -0.13
LITAF-201ENST00000339430 MRPS24Q96EL2 167 aaKnown RBP14.22□□□□□ -0.13
LITAF-201ENST00000339430 MED13Q9UHV7 2174 aa14.22□□□□□ -0.13
LITAF-201ENST00000339430 FAM230AA0A1W2PPH8 454 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 ARGFXA6NJG6 315 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 TSPAN4O14817 238 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 SGCEO43556 437 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 MTRF1O75570 445 aaKnown RBP14.21□□□□□ -0.13
LITAF-201ENST00000339430 TRAPPC6AO75865 159 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 SFT2D2O95562 160 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 P04436 131 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 B4GALT1P15291 398 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 WT1P19544 449 aaPredicted RBP14.21□□□□□ -0.13
LITAF-201ENST00000339430 FPR2P25090 351 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 ANKRD55Q3KP44 614 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 SGCZQ96LD1 299 aa14.21□□□□□ -0.13
LITAF-201ENST00000339430 SPRY1O43609 319 aaPredicted RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 CXCL13O43927 109 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 SLC34A2O95436 690 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 TMEM225BP0DP42 221 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 CBX5P45973 191 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 MTCP1P56278 107 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 CARD18P57730 90 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 CLN3Q13286 438 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 FAM27BQ5VT28 67 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 TMEM17Q86X19 198 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 TMEM185AQ8NFB2 350 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 AKR7LQ8NHP1 331 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 NTNG2Q96CW9 530 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 ARPC5LQ9BPX5 153 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 ZNF581Q9P0T4 197 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 GHRLQ9UBU3 117 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 MCTS1Q9ULC4 181 aaKnown RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 ARID1AO14497 2285 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 H0YIZ8 118 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 KNG1P01042 644 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 ALDH3B1P43353 468 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 CYB561P49447 251 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 SUCLG1P53597 346 aaKnown RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 RAC3P60763 192 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 MRPS34P82930 218 aaKnown RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 CHRFAM7AQ494W8 412 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 WIPI1Q5MNZ9 446 aaPredicted RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 ABHD17BQ5VST6 288 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 LHFPL1Q86WI0 220 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 SEMA6DQ8NFY4 1073 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 RRNAD1Q96FB5 475 aaKnown RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 REEP6Q96HR9 211 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 RNF126Q9BV68 326 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 SHARPINQ9H0F6 387 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 METTL8Q9H825 291 aaKnown RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 BARX1Q9HBU1 254 aaPredicted RBP14.2□□□□□ -0.14
LITAF-201ENST00000339430 TAS2R3Q9NYW6 316 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 OSGIN2Q9Y236 505 aa14.2□□□□□ -0.14
LITAF-201ENST00000339430 GJE1A6NN92 205 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 CPT2P23786 658 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 SNTB1Q13884 538 aaKnown RBP14.19□□□□□ -0.14
LITAF-201ENST00000339430 LINC00696Q6ZRV3 163 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 MOB3CQ70IA8 216 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 PEG10Q86TG7 708 aaKnown RBP14.19□□□□□ -0.14
LITAF-201ENST00000339430 GGNQ86UU5 652 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 OR5AP2Q8NGF4 316 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 NMES1Q9C002 83 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 PLEKHJ1Q9NW61 149 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 A0A0B4J2A0 478 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 NUPL2O15504 423 aaKnown RBP14.19□□□□□ -0.14
LITAF-201ENST00000339430 APOC3P02656 99 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 LCATP04180 440 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 SERPINA5P05154 406 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 ZNF32P17041 273 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 TAS2R46P59540 309 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 SLC16A14Q7RTX9 510 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 INTS12Q96CB8 462 aaKnown RBP14.19□□□□□ -0.14
LITAF-201ENST00000339430 OR10C1Q96KK4 312 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 TM2D1Q9BX74 207 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 SHPKQ9UHJ6 478 aa14.19□□□□□ -0.14
LITAF-201ENST00000339430 DHRS7CA6NNS2 312 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 CEACAM18A8MTB9 384 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 SYNGR3O43761 229 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 APOC1P02654 83 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 HOXB5P09067 269 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 CRYGSP22914 178 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 SRD5A2P31213 254 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 PPIAP62937 165 aaKnown RBP14.18□□□□□ -0.14
LITAF-201ENST00000339430 SPINK14Q6IE38 97 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 AAED1Q7RTV5 226 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 ZSCAN4Q8NAM6 433 aaPredicted RBP14.18□□□□□ -0.14
LITAF-201ENST00000339430 OR52H1Q8NGJ2 320 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.18□□□□□ -0.14
LITAF-201ENST00000339430 OR5AC2Q9NZP5 309 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 IGKV1-27A0A075B6S5 117 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 CNR1P21554 472 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 ARHGDIBP52566 201 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 RAB35Q15286 201 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 TAF9Q16594 264 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 PAN3Q58A45 887 aaKnown RBP14.18□□□□□ -0.14
LITAF-201ENST00000339430 DRAM2Q6UX65 266 aa14.18□□□□□ -0.14
LITAF-201ENST00000339430 GPR137CQ8N3F9 429 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms